Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2145 ATGTCCATAAAGGAGGATGATGTTAATAATGATTCTGATAATGATTTGGGTGTTGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCTCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTAGAGGATATTTGGAACCAGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGATGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTTATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCTAGCTCGGCTTAGGATAAAGCTTGACTACGGCTGTGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATTTGGTACCGGCCAATCGTCATCTCACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGCGGTATATTGTATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAAACGGGGATGCCAATGCGATGGGCAGTTAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGACCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAAGAAATGCTTGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGATGGACAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAGAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCATTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTTAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTGGGAGACCCGGCCAAAGATCGCCGGGTGGAAGTCGATAGAGGTAAGAATTTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGATATGCCTATGAATGATGACATCGAAAAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCATTCGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCAAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGACGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGCGGAACCTCCATGAAAGCAGCGAATCCATTGACATCGCGTCCACGAATGGTGTTTTCAATAAAAATCTCTACTCGTTAACACAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCAAGAACTATGAATGCGTTAATGATGTCGTTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCCGAGATCCGTTAACATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCACAGGACACTTTGA 2382 0.4316 MSIKEDDVNNDSDNDLGVDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNQEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLYMDDRSREARSLTRTKCLARLRIKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRHLTVTDRVQVENLHNFGVKSCHIMRYIVFQKGGYRHAGFTRKDLYNHIDRYRRAKVKKRGCQCDGQLIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSDLLSDETTETYKWLLETFVEAMGGKSPKARNACENIKNPNFLRDFKGLIYDNNDQRDFDRRWTAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNEFISTDMPMNDDIEKSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDRSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKPFKKGGTRKFTTTGMRNRKGKDNTFVERNLHESSESIDIASTNGVFNKNLYSLTQVKESQQDKRHSFKNYECVNDVVDDKCDTRHVQIDVRDPLTSSLPCGNKQGSYMALFASMHRTL* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2145 793 MobiDBLite consensus disorder prediction 564 603 - -
Ahy5g2145 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 204 IPR031052 GO:0006355
Ahy5g2145 793 MobiDBLite consensus disorder prediction 1 42 - -
Ahy5g2145 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 239 315 IPR031052 GO:0006355
Ahy5g2145 793 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 327 558 IPR031052 GO:0006355
Ahy5g2145 793 MobiDBLite consensus disorder prediction 22 39 - -
Ahy5g2145 793 ProSiteProfiles Zinc finger CCHC-type profile. 610 625 IPR001878 GO:0003676|GO:0008270
Ahy5g2145 793 SMART 26again6 511 538 IPR006564 GO:0008270
Ahy5g2145 793 ProSiteProfiles Zinc finger SWIM-type profile. 500 536 IPR007527 GO:0008270
Ahy5g2145 793 MobiDBLite consensus disorder prediction 634 695 - -
Ahy5g2145 793 PANTHER OS03G0181600 PROTEIN 327 558 - -
Ahy5g2145 793 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy5g2145 793 MobiDBLite consensus disorder prediction 651 670 - -
Ahy5g2145 793 Pfam MULE transposase domain 253 314 IPR018289 -
Ahy5g2145 793 SUPERFAMILY Retrovirus zinc finger-like domains 596 628 IPR036875 GO:0003676|GO:0008270
Ahy5g2145 793 PANTHER OS03G0181600 PROTEIN 239 315 - -
Ahy5g2145 793 PANTHER OS03G0181600 PROTEIN 58 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2145 Ahy-Chr5 92038010 92041012 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g2145 FAR1 1.00E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2145 - - ahf:112803750 1627.84