Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2132 ATGGCTAGCTGGGTTATTGACATTGGAGGACTTGCAAAGAAAGTGAAGAATAATACATTGCCATTAGCTGATCAAATCAATGACTGTGGAGCATATTGTGAATGTCCAATATGTCATTATCACATTGATAACATTGATGTTTCTCCTGAGTGGCCAGGCTTTCCGGCCGGCGTGAAGTTTGATCCTTCCGACATAGAACTGTTAGAACATTTGGCAGCAAAATGTTGTGTTGGGAACAAAGTGCCTCATGCCTTTATCCAAGATTTCATCCCAACACTAGAAGGAGACCAAGGAATATGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGGCCAGTGTTCATTTCTTTCACAAAACAACTAATGCATATGCTACCGGACAACGAAAGCGTCGAAAGATTAATCATCAACTAGGCCTAAGTGAGGAGCATGTTCGCTGGCATAAGACCGGTAAGACCAAAGCTGTAACAGAAAATGGAGTACACAAGGGCTTCAAGAAGATCATGGTTCTTTACGTAAGGCCTAAGAGAGGAGCAAAGCCGAATAAATCGAAATGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGGTGAGAAGGAAGGTGAATATGTGGTTTCAAAGATTTTCTATCAGCAGCAGAAGAAAACTAAGAAGAATAAGCTGAATCCATTGGTGGCTGAAGATTCTGTCATGGCATTACAAGCAAGTCCAAGAACACCGAATCCAAATCCACCAAAACGGCCTCGGACAGGAAAATCTGTTGATTTTGAAGAAACTGACCTTATGCTATTCACTCAGGTAGGTAGCTATTGA 825 0.4206 MASWVIDIGGLAKKVKNNTLPLADQINDCGAYCECPICHYHIDNIDVSPEWPGFPAGVKFDPSDIELLEHLAAKCCVGNKVPHAFIQDFIPTLEGDQGICYTHPENLPGAKKDGASVHFFHKTTNAYATGQRKRRKINHQLGLSEEHVRWHKTGKTKAVTENGVHKGFKKIMVLYVRPKRGAKPNKSKWVMHQYHLGSEEGEKEGEYVVSKIFYQQQKKTKKNKLNPLVAEDSVMALQASPRTPNPNPPKRPRTGKSVDFEETDLMLFTQVGSY* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2132 274 Pfam No apical meristem (NAM) protein 55 196 IPR003441 GO:0003677|GO:0006355
Ahy5g2132 274 ProSiteProfiles NAC domain profile. 54 215 IPR003441 GO:0003677|GO:0006355
Ahy5g2132 274 MobiDBLite consensus disorder prediction 233 259 - -
Ahy5g2132 274 SUPERFAMILY NAC domain 39 215 IPR036093 GO:0003677|GO:0006355
Ahy5g2132 274 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 3 264 - -
Ahy5g2132 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 264 IPR044799 GO:0003700
Ahy5g2132 274 Gene3D NAC domain 63 221 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2132 Ahy-Chr5 91854023 91857486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2132 35 217 NAC Transcription Factor Family AT1G28470 54.497 6.44e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g2132 NAM 2.80E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2132 - - ahf:112799760 563.148