Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2120 ATGACGATCTCATCATTATCACTCTCTAAAGTTGTAATAATGCTCATACTTGTTTCTTTCAATCTCAATATTGGTATGAGTGCTGATACACTTCTTAATCCTTGGGGGAAAGTTCATGTGACCATGAACAACAAACTGAACAATACGCAGCTTGATATTCATTGCAAGGATAAACATTGGGATTCAAAGCCCCAAGTAGTTCCAATTGGTCAAAGTTGGACTTTTCATTTTCGTAACAACCCTTTTTCAAATTATTTGTTCTTTTGTAGCTTTGCTTGGGTAGAGGGGGGAATATTCGAAGTGCGTCGCTTTGATATTTATGTGGCTGGACGTGACGATGATGTATGCCAACAGTGTACTTGGGACATCTCCGAAAAAGGTCCATGTAGGGTTTCGGGTTATGAGGCTCCTGCATGTTATGCTTGGAAACAGGAAAATCCGCAATGCAAACACTACTCCCTTCACCACAGAAGAAAACGAGACAGAAGTAGAGAGGAGGAGAGGGAGAAGAGCATCGCGCCTCACCGCCGCCACCGTGCCTTGCCGCCGTGGCCTAACAGCGTCGCCGCCGGCCGTGAAGCTGCCGCCATAGTCCGTCGTGGCAGCTGCAAGCTCACCGCGTCGCGCCGCCTTGGAGTCCGCCGTCAGGTTCGAGGCGAAGAGAGAGGTCGAAACAGAGGGCTACGCGAGGAAGAGGGTGGTCGTGGGTCGCCGTTTTGCCTCGCCTTTGCCACTGAGGCCACGCCCAGTCCAGCCACGCCACCATCCCTGCGCCGTCACCAAGCAAATCTGAGGTTTCCTCTTCTTCATCTTCTTCTCTCCTCTTCCTATCTGCTGAGATGCCCTAGCCAATTACCCAACCCAGCAACCTTAACTCCACACAACGCTAAACGCGAACCCATCCCTCCCATCACCTTCGAGCTCCTCCTTCCTCTCTCCGTCATCGATCTAACTACCTCACCTCCGTCCATCTCCCGACGCCGTCGCCGAAATGAGCTTCGAAGCCACCGTCGTTATCGTGCAGCTCTGTTCCACCATCGTGCAGCTACTGTTTCAGCTTTGAAAGCATCGTCGCGCAGCTCGGTTCCATCGTCGCCGAGGTCGCCTCCTTTTTCCGTCGAGCAGCTCTGTTCCATCGTCGCCGGCGCTATCTCTGTTCCTTTTTCCTTCACGTGGAACACACTCATAAGAGCATATGCTAGAACCGCAGATCAAAAACACAAGTCCATGGAACTTTATAGAGCAATGTTAATGATGGAACGAGAACAACAAAGTGCAGCGGTTATTCCTGATAATTACACATACCGTTTTGTATTAAAGGCATGTGCTTACTTGTTCTCTCTTTCTAAAGGGAAACAGGTGAATGCTCATGTATTGAAACTTGGGTTTGAATCGGATACTCATATTTGTAACAGTTTGATTCATTTTTATGCAACTTGTGGGTTTCTAGACTTGGCACACAAGGTGTTCGAGAAAATGTCTGAGAGAAGTGAGGTTTCATGGAACATCATGATTGACTCTTATGCAAGTGCTGGATATTATATGACAAGCGATATAATCTCTTCCATTATCCAGTCTCAGACGAAGATGCTCCTAACTATCACTCAATTATCCAGAACCCGATGGACACGGTAA 1635 0.4813 MTISSLSLSKVVIMLILVSFNLNIGMSADTLLNPWGKVHVTMNNKLNNTQLDIHCKDKHWDSKPQVVPIGQSWTFHFRNNPFSNYLFFCSFAWVEGGIFEVRRFDIYVAGRDDDVCQQCTWDISEKGPCRVSGYEAPACYAWKQENPQCKHYSLHHRRKRDRSREEEREKSIAPHRRHRALPPWPNSVAAGREAAAIVRRGSCKLTASRRLGVRRQVRGEERGRNRGLREEEGGRGSPFCLAFATEATPSPATPPSLRRHQANLRFPLLHLLLSSSYLLRCPSQLPNPATLTPHNAKREPIPPITFELLLPLSVIDLTTSPPSISRRRRRNELRSHRRYRAALFHHRAATVSALKASSRSSVPSSPRSPPFSVEQLCSIVAGAISVPFSFTWNTLIRAYARTADQKHKSMELYRAMLMMEREQQSAAVIPDNYTYRFVLKACAYLFSLSKGKQVNAHVLKLGFESDTHICNSLIHFYATCGFLDLAHKVFEKMSERSEVSWNIMIDSYASAGYYMTSDIISSIIQSQTKMLLTITQLSRTRWTR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2120 544 Pfam Plant self-incompatibility protein S1 39 142 IPR010264 -
Ahy5g2120 544 PANTHER BNAC04G18690D PROTEIN 387 517 - -
Ahy5g2120 544 PANTHER OS01G0913400 PROTEIN-RELATED 387 517 - -
Ahy5g2120 544 MobiDBLite consensus disorder prediction 159 176 - -
Ahy5g2120 544 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 466 500 IPR002885 -
Ahy5g2120 544 Pfam PPR repeat 470 496 IPR002885 -
Ahy5g2120 544 Pfam PPR repeat 390 401 IPR002885 -
Ahy5g2120 544 Pfam PPR repeat 499 514 IPR002885 -
Ahy5g2120 544 MobiDBLite consensus disorder prediction 153 185 - -
Ahy5g2120 544 Gene3D Tetratricopeptide repeat domain 382 448 IPR011990 GO:0005515
Ahy5g2120 544 Gene3D Tetratricopeptide repeat domain 449 518 IPR011990 GO:0005515
Ahy5g2120 544 TIGRFAM PPR: pentatricopeptide repeat domain 469 497 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2120 Ahy-Chr5 91660417 91680781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2120 33 146 Carbohydrate Esterase AT3G16970 31.667 2.40e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2120 - - ahf:112803732 974.541