Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2118 ATGACGATCTCATCAAAATCACTCTCTAAGGTTGTAATAATGCTCATACTTGTTTCTTTCAATCTCAATGTCAGTATGATTGATGGTCAAGTTGATTTTCCTCAACGTTATAAGGTTTATGTGACAATGCAAAACAAACTGCCGGATATGCAGCAGCTTGGTATTCAATGCAAGGATAGAACTCACGATTTAGGGTTCCAAGTTGTTCCAGCTGGTCTAAGTTGGACTTTCTATTTCAATCCAGGATTTATTAACACAGCTTTGTTCTTCTGTACCTTTAATTGGTATGAGGGGGGAGATGTACATCGCTTTGATATTTATGATGCTGACCGTGATGCTGGTGTATGCGACCAGTGTACTTGGGACATCCACAATTACGGTCCATGTAGGGTTACGGGCAAGGGTGCTCCTAAATGTTTTCCTTGGAAGAACTAA 435 0.4023 MTISSKSLSKVVIMLILVSFNLNVSMIDGQVDFPQRYKVYVTMQNKLPDMQQLGIQCKDRTHDLGFQVVPAGLSWTFYFNPGFINTALFFCTFNWYEGGDVHRFDIYDADRDAGVCDQCTWDIHNYGPCRVTGKGAPKCFPWKN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2118 144 Pfam Plant self-incompatibility protein S1 41 142 IPR010264 -
Ahy5g2118 144 PANTHER - 16 142 IPR010264 -
Ahy5g2118 144 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2118 Ahy-Chr5 91455129 91455644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2118 38 144 Carbohydrate Esterase AT3G16970 31.858 5.99e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2118 - - ahf:114927777 177.178