Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g2117 ATGAAGAGGAATCCTAGGAAAGTAAAATGGACCAAGGCGTATAGGCAGGTGCATGGAAAGGATATGACTCAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAGAGATATGACAGGAATCTTGCGGAGAACGTCCTTAAGGCCATTCCAAAGATTGAAAAGATCAGAGTCACCAAGGAGGAAAGGCACCATAAGAATAGAATGAAGGGCAAGAAAGAAAAGATTCAGAAGGAGGCAGCAAAGGAGTTGGAGCAGGGCATCAGTTTGGTTAAATCTCCTTTGGCTCTTCAGAAGGACCCATCTCTTACATTACCACAAAAGATCAAAGTCTCTGTTTTCCAATGGCAATCAGAGGACAACAATGCGATGGAGGAGTGA 387 0.4393 MKRNPRKVKWTKAYRQVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIEKIRVTKEERHHKNRMKGKKEKIQKEAAKELEQGISLVKSPLALQKDPSLTLPQKIKVSVFQWQSEDNNAMEE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g2117 128 Coils Coil 68 88 - -
Ahy5g2117 128 Pfam Ribosomal protein L24e 1 24 IPR000988 -
Ahy5g2117 128 PANTHER BNAA04G10330D PROTEIN 1 128 - -
Ahy5g2117 128 PANTHER 60S RIBOSOMAL PROTEIN L24 1 128 IPR000988 -
Ahy5g2117 128 Gene3D Ribosomal protein L24e 1 27 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g2117 Ahy-Chr5 91450211 91452005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g2117 1 128 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 57.812 1.02e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g2117 K02896 - gmx:100793564 210.69