LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy5g2034	ATGGATTTGAGCTCTAAATCCTACAAATGGAAGTATGATGTATTCTTGAGCTTTAGAGGGGATGATACACGTAGGAGTTTCACAAGCCATCTTTATCATTCTCTTTGCCAAAAGGGTGTCAATACTTTCATAGACTACAAGGATCTCATAAAGGGAGAGCAGATAACACCTTCACTTCTTAGGGCTATTGAAGCCTCAAGGATCTCAGTCCTTGTATTATCTGAAAACTATGCATCTTCCACTTCTTGCTTGGATGAACTCCTTAAGATCATTGAGTGCAAGGACACTAAGGGTCAGCTGGTTTTGCCGGTCTTTTATGGTGTGAATCCATCTCAAGTAAGAGAACAGAAGGGAAGTTTTGCAGAAGATTTGGCCAAACATGAAGACAAGTTCAGGGATGATGTCAACAAAGTAAAAAGGTGGAGGGCAGCACTATGTGAGGCTTCTACTTTGTCTGGGTGGCACATGGGTGACGGGCAAGAATCAAAATTTGTCCAGAGAATTGTTGAGGAGATATTGAGTAAGTTGAACCGCACACCTTTCAATGTTGCTAAGCATCCTGTTGGATTGGATTCACCTATTGAAGATATAAAAACACTTTTAGATACTGGATCAGATGATGTACAGGCTATAGGAATTTATGGAATTGGAGGTATAGGGAAAACAACACTTGCTAAGGCTGTTTATAACCATATTGCTAACCAGTTTGAGGGTAGTGCATTCATTGCAAATGTTAGAGAAATTTCAAGTCAAAGATCTGGGTTAGTTCAACTACAAGAAGCTCTTCTTTCTGAGATTTTGAACCATAGATATTGTAAAGTAGGAAACAAAGACAGAGGCATTAATATGATAAAGAATAGGCTTTGCAGCAAAAAAGTTCTCATAGTTGTTGATGATGCTGATTCGTTGGAGCAACTGGAATCATTGATTGGAGAATATAGTTGGTTTGGTTCTGGAAGTAGAATCATCATAACAACTAGAGATGAGCATTTGCTAGTTGCTCACAATGTGGAAACAATCTACAAGGTCAACGAATTAAATCATGGTCATGCACTTGAACTTTTTAGTTGGTTTGCGTTCAAAAATCCATGTCCTCCAACAAATTGTGAGAAGCTTTCATCCCACATATTAAACTATGCCAAGGGCCTCCCATTGGCACTAACAGTTTTGGGATCTCACCTGTGTGGTAGGGGAAAAGCTGAGTGGATAAGTGCATTAGCTAAACTGAAAAAAGTTCCAAACAAACAGATTTTTGAAATACTTAAAATCAGCTTTCATGGATTGGAAGAGAATGAAAAGGCTATTTTTCTTGATATTGCATGTTTCTTTAAGGGAGAGGACAGACAATATGTGAAAATGATATTAGATGGTTGTGACCTACATTCGGATAATGGTTTCGGAGTTCTATTGGAGAAGTCTCTAATTACAATAGAAGTTAATAAGATTTGGATGCATGATTTGCTACAGGAAATGGCTAAAGAAATTGTGCGACTTGAATCCCCTAGTGATCCTGGTAAACGTAGCAGATTATGGTTTAATGAGGATGTTCTTCATGTATTAAAACACTATAAGGGAAGTAACAACATTGAAGGCATAAAGCTAGACATACCGGAATCAGAGACAGAGTACATAGAGGCCAAGGCCTTGTCAAGGATGAATAGACTTAGAATTCTTATTATCAACAATGTGCATGTTACAGATGATATCCAGTATCTACCTGATGAGCTAAGATTGATTGATTGGCCAAGATACCCCTCTTCAACTCTACTACCAAATTTCCATCCAAGGAGGCTTGTCTATCTAAATATGAGTCATAGTCGCATCAAGCACTTGTGGAATGGAGTTAAGATATTCAGAGACTTGAAACTTGTGTCTTTTAGCAGCTGTGAACACCTTAAAGAAATTCCAGACTTCTCAATGGTTCCAAACCTAGAAAGCCTAAGCCTAGACAACTGTAGAAGTTTAATTAAGGTGCATGAGTCTGTGGGAACTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGATGTTTCCAAGTCGTTTCATGCTAAAATCACTCCATACTCTCCTCCTCACTGGCTGCTCAAAACTAAAAAAGTTTCCGGAGATTGTGGGGAACATGGAACATCTTGAAGAAATCCTTCTCCAAGGAACAGCAATAAAAGAACTACCTCAGTCAATTGAATATCTAAGTGGGCTGAAGTCCTTATTCTTAGAGTCTTGCCAAAGTCTTGAGCATCTCCCCAGTAGCCTTCAGAAGTTGCAAAACCTTACTATTCTTGATCTAAGTGGCTGCTCTAAGCTTCAAAAGATTCCAAAGCTTCCCCTAAATACAAGATATATAGACTTGAGTAATTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCATATCAAATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTAGATTTGTTAACTGCCATAAACTGGTAAATAAATAA	2487	0.38	MDLSSKSYKWKYDVFLSFRGDDTRRSFTSHLYHSLCQKGVNTFIDYKDLIKGEQITPSLLRAIEASRISVLVLSENYASSTSCLDELLKIIECKDTKGQLVLPVFYGVNPSQVREQKGSFAEDLAKHEDKFRDDVNKVKRWRAALCEASTLSGWHMGDGQESKFVQRIVEEILSKLNRTPFNVAKHPVGLDSPIEDIKTLLDTGSDDVQAIGIYGIGGIGKTTLAKAVYNHIANQFEGSAFIANVREISSQRSGLVQLQEALLSEILNHRYCKVGNKDRGINMIKNRLCSKKVLIVVDDADSLEQLESLIGEYSWFGSGSRIIITTRDEHLLVAHNVETIYKVNELNHGHALELFSWFAFKNPCPPTNCEKLSSHILNYAKGLPLALTVLGSHLCGRGKAEWISALAKLKKVPNKQIFEILKISFHGLEENEKAIFLDIACFFKGEDRQYVKMILDGCDLHSDNGFGVLLEKSLITIEVNKIWMHDLLQEMAKEIVRLESPSDPGKRSRLWFNEDVLHVLKHYKGSNNIEGIKLDIPESETEYIEAKALSRMNRLRILIINNVHVTDDIQYLPDELRLIDWPRYPSSTLLPNFHPRRLVYLNMSHSRIKHLWNGVKIFRDLKLVSFSSCEHLKEIPDFSMVPNLESLSLDNCRSLIKVHESVGTLDKLVTLNLLFCSNLKMFPSRFMLKSLHTLLLTGCSKLKKFPEIVGNMEHLEEILLQGTAIKELPQSIEYLSGLKSLFLESCQSLEHLPSSLQKLQNLTILDLSGCSKLQKIPKLPLNTRYIDLSNCRSLTSFPTLSSISNFIAEDFPRFYQIRFVNCHKLVNK*	829

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy5g2034	828	Gene3D	-	345	429	IPR042197	-
	Ahy5g2034	828	Gene3D	-	174	341	IPR027417	-
	Ahy5g2034	828	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	12	698	-	-
	Ahy5g2034	828	Pfam	TIR domain	11	180	IPR000157	GO:0007165
	Ahy5g2034	828	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	176	439	IPR027417	-
	Ahy5g2034	828	ProSiteProfiles	TIR domain profile.	10	176	IPR000157	GO:0007165
	Ahy5g2034	828	Gene3D	Ribonuclease Inhibitor	687	827	IPR032675	-
	Ahy5g2034	828	SMART	till_3	11	151	IPR000157	GO:0007165
	Ahy5g2034	828	Pfam	NB-ARC domain	193	414	IPR002182	GO:0043531
	Ahy5g2034	828	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	12	698	IPR044974	GO:0006952
	Ahy5g2034	828	PRINTS	Disease resistance protein signature	210	225	-	-
	Ahy5g2034	828	PRINTS	Disease resistance protein signature	380	394	-	-
	Ahy5g2034	828	PRINTS	Disease resistance protein signature	757	773	-	-
	Ahy5g2034	828	PRINTS	Disease resistance protein signature	287	301	-	-
	Ahy5g2034	828	SUPERFAMILY	Toll/Interleukin receptor TIR domain	5	154	IPR035897	-
	Ahy5g2034	828	SUPERFAMILY	"Winged helix" DNA-binding domain	416	521	IPR036390	-
	Ahy5g2034	828	Gene3D	-	8	173	IPR035897	-
	Ahy5g2034	828	Gene3D	Ribonuclease Inhibitor	522	686	IPR032675	-
	Ahy5g2034	828	SUPERFAMILY	L domain-like	507	807	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy5g2034	Ahy-Chr5	90354184	90358697	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy5g2034	12	810	WRKY Transcription Factor Family	AT4G12020	33.374	4.04e-114	380

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy5g2034	-		-	ahf:112749316	1311.59