Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1999 ATGTCAAGCTGGCTTATGCAAATTTCTCAACAAATCATGATCTTGCCTTTTAACATAACAACAATTCTTTACTATGTATCATTGTTTTTGTTTCTGTTTTTATTGTTTTTGAGCAACAATAACAAAAATAGTAGCCTGGTCTTGTGCAGTGATCAAAGTTTTTATCCACAAGAAAGGGAGGCTTTGTTGTTTATAAGGGATTCTCTAAATTCTTCTATTGATTTGCATGGGAATTGGGTTGGTCCACCATGCATTGGAGAAAATCAAAGCAAATGGTTTGGTATCACTTGTTCTAATTTTCATGTTGTTCACATTGTTCTTGAAGGGATTAACCTTAGTGGAACTTTGAAAAATCCTACATTCCTTCAAAACATTACTCTCTTGAAGAAACTCAGCTTCAGAAACAATTTGCTTCTTGGGATGCTACCAAATCTCACAAATTTGGTGTCTTTAGAAGAAGTGATCTTTTCAGATAATCACTTCTCAGGGAAAATTCCTTCTGGGTATGTTGATCTTCCTATTCTAAGAGTTTTGGAGCTGCAAGAGAATTACTTGGATGGTCAAATTCCATCCTTTGATCAACCATCATTGGAAAGTTTCAACCTTTCATATAATCATTTGGTGGGGCCTATTCCTCAGACTCATGTGATTCAAAGGTTTCCAGTGAGTTCCTTTGACAATAACACAGATCTTTGTGGAAAGCCATTGGATAAGTTATGTCCTGAACCTTCTCCTGCTCCATCTCCTATGCCAGAACCAGAAGTTAGAAAAAATAAGAGACTCAAAGTTTGGATTATTGCTTTGATTGCTTCTTCTTCTGCACTGTTTCTGTTTCTGATCATCGTTGCTTTGTTGTTTTGTAAAAGAAGGGCTAGTGCAGAAGAAACAAGAAGAAAAGATTCAAAAGATTCAGCAGGGTATGTATTTGGAGCATGGGCAAAGAAAATGGTGTCTCACTCCTTCAGTGAAGATTCTGAAAGATTAGGAAGATTGGAATTTTCCAACAAGAAGTTTCCAGTATTTGACTTAGATGATTTGTTAAGGGCATCAGCAGAAGTTCTAGGGAGGGGCAAATTGGGTATTACATACAAAGCAACACTTGAAAATGGTGCTCTTGTTGCTGTGAAGAAACTTAGCTGCATGAATGAATTGAGCAAAAAGGAATTTCTTCAGCAGATGCAATTGCTTGGGAGCATCAAGCATGAAAATCTTGTAGAGATTATATCTTTCTATTATTCGGAGGAGCAAAAGCTCATCATTTATGAGCTTATGAATGATGGAACTTTGTTTGAGCTCTTACATGAGGGTAGAGGAATTGGAAGAATGCCACTTGATTGGACCACAAGAATGTCCATTATCAAAGACATAGCAAAGGGTGTTGCATTTCTTCATGAATGTTTGTCATATCAAAAGGTCCCTCATGCAAACCTAAAATCAACCAATGTCCTAATTCAACAAGATAGCCAAGGAGCCTACAACCATTCCAAGCTCACAAATTATGGATTCTTTCCACTTCTAAGTTCAAAGAAGAAAAACCATGCTGAGAAACTAGCCATAAGCAAGTCAACAGAATTTGTCAAAGGGAAGAAACTAACACACAAAGCAGATGTTTATTGCTTTGGTATCATCATGCTTGAGATCATAACTGGGAAGATTCCTGGCCAAGTAACTAGTGCTAATGATGATGATATTGTAAGTGATCTTTCAGATTGGGTGAGAACTGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAGTTATTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAAGTTAACTGAATTAGCACTAGAATGCACTCATGTTACACCAGATAATAGGCCTAAGATGAGTCAAGTGTTAAGGACAATACAAGAGATAGAACAAAATCACAAGAGCCAATAA 1914 0.3678 MSSWLMQISQQIMILPFNITTILYYVSLFLFLFLLFLSNNNKNSSLVLCSDQSFYPQEREALLFIRDSLNSSIDLHGNWVGPPCIGENQSKWFGITCSNFHVVHIVLEGINLSGTLKNPTFLQNITLLKKLSFRNNLLLGMLPNLTNLVSLEEVIFSDNHFSGKIPSGYVDLPILRVLELQENYLDGQIPSFDQPSLESFNLSYNHLVGPIPQTHVIQRFPVSSFDNNTDLCGKPLDKLCPEPSPAPSPMPEPEVRKNKRLKVWIIALIASSSALFLFLIIVALLFCKRRASAEETRRKDSKDSAGYVFGAWAKKMVSHSFSEDSERLGRLEFSNKKFPVFDLDDLLRASAEVLGRGKLGITYKATLENGALVAVKKLSCMNELSKKEFLQQMQLLGSIKHENLVEIISFYYSEEQKLIIYELMNDGTLFELLHEGRGIGRMPLDWTTRMSIIKDIAKGVAFLHECLSYQKVPHANLKSTNVLIQQDSQGAYNHSKLTNYGFFPLLSSKKKNHAEKLAISKSTEFVKGKKLTHKADVYCFGIIMLEIITGKIPGQVTSANDDDIVSDLSDWVRTVVNNDWSTDILDLELLAEKEGHDAMLKLTELALECTHVTPDNRPKMSQVLRTIQEIEQNHKSQ* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1999 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 43 632 - -
Ahy5g1999 637 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Ahy5g1999 637 ProSiteProfiles Protein kinase domain profile. 348 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1999 637 Gene3D Ribonuclease Inhibitor 55 242 IPR032675 -
Ahy5g1999 637 Pfam Protein tyrosine and serine/threonine kinase 352 626 IPR001245 GO:0004672|GO:0006468
Ahy5g1999 637 SUPERFAMILY Protein kinase-like (PK-like) 351 631 IPR011009 -
Ahy5g1999 637 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 43 632 - -
Ahy5g1999 637 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Ahy5g1999 637 SUPERFAMILY L domain-like 55 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1999 Ahy-Chr5 89953882 89956999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1999 88 631 Receptor kinase-like Gene Family AT1G68400 34.934 1.73e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy5g1999 PK_Tyr_Ser-Thr 1.70E-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1999 - - aip:107641436 1186.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3288 15 154952985 154955554 Ahy5g1999 5 89953882 89956999 hybridization