Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1956 ATGCCACATATAAGGGAAACAAATCTAGATATATCAATCATAGTTGCTGTCCCAATACAGAGATGCAGAAATGATGGTGAAACCAGAATAGCCATTTTTGCTACACGAGACATTCAAAAGGGTGAACAACTCACCTACGATTACCGGTTTGTCCAATTTGGCGCAGACCAAGAATGTCACTGCGGTGCTGTTGCCTGCAGGCGTAAGCTTGGTGTCCAACCTACAAAGCCTAAAATGTCAGTTAAATGTCAGGTATATCAGAATGGAGGTTTGCAAATTGGCAGTTCTCAAGTTTTTGCGCAATCAAAAAGCTTAAAAGTTTGCATTGGGGAAGTTATTAGGATAAAACACCTTGAACATGTGAGGTTTGGGCTTATTAAATGGTTTAACAAATATTCCCGAAAACACTTGATCCTGTTTGAAGATGGCTGTGTTGAAATTTTTGACATGTCTAAAGAAGATTGGGAACTCACTAGTTTGTGGTGCAATTACTTTTGA 498 0.3916 MPHIRETNLDISIIVAVPIQRCRNDGETRIAIFATRDIQKGEQLTYDYRFVQFGADQECHCGAVACRRKLGVQPTKPKMSVKCQVYQNGGLQIGSSQVFAQSKSLKVCIGEVIRIKHLEHVRFGLIKWFNKYSRKHLILFEDGCVEIFDMSKEDWELTSLWCNYF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1956 165 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 19 157 - -
Ahy5g1956 165 Gene3D SET domain 3 88 IPR046341 -
Ahy5g1956 165 PANTHER SET DOMAIN PROTEINS 19 157 - -
Ahy5g1956 165 SMART PostSET_3 55 71 IPR003616 -
Ahy5g1956 165 Pfam SET domain 22 48 IPR001214 GO:0005515
Ahy5g1956 165 ProSiteProfiles Post-SET domain profile. 55 71 IPR003616 -
Ahy5g1956 165 SUPERFAMILY SET domain 19 67 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1956 Ahy-Chr5 88331249 88340166 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy5g1956 SET 3.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1956 - - ahf:112801775 341.658