Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1950 ATGTCTGACGGCGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCAGGGATGGAGTCGGACGAGTACGACTTTCAGGAAGATGAAACAGAACACGACCATCATGCAGAGGCCGATGTCGACAACAGGGATGCGGTTGAATTGGAAGACAGTTTAGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTAATTCTGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTTTCTGGTTTAATTTTGCCGACGTTGACATTGCATTTGAGTTCTACCAGAAATATGCAAAGCACCATGGCTTCGGGGCGAGACGTTCCAGAAGCGAAAAACGCGGTGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAAGACATTGGCACGTTGCGTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGCTGCGATTTTCTTCCATGCTTCCAGGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCGAGCCTAGCCGGCGGGTATCATAATGTCCCGTACACAACAAGGGACATGCACCATGTAAATGCGAAGCAACGAAGGGAGGGTGTCCTAGATGCGGAATCGTGCCTAAGGTATCTCCGACAGTGCAAGACAAATGATCCAGCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAATATTTGTTTTGGTGTGACGGCACCAGCCAAATTAATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTACAAGAAAAACGTTTACCTTTCGCCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTATATTTGCCGCTGCACTGGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCGGTGTCCATAATAACCGACGGTGACAGGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCCGGAGGCTCACCATCGACTCTGTGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACTAGGATGCTTAGGGATTGCATGCTTGGCGACTACGAGGTCCGAACATTCCAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGGGAAAGTTCTTTGCCGGATTTCGAACAACATCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCATCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATGTCGAGTGTGCAAAGGGTGACCCTGTTATGACCACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCATGCGATATTCTATTTGTTTGTTCCCATTCTTGACAGGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCTTATTTTATCCACACCGTCTCTCGATACGGCACTCCGGGGAAGGATTGGCGTGTTATTGCAACGTCTGATACGAGGGAGGTCCGATGCACGTGCATGAGAATGGAATGTTTCGGGGTCCCCTGCGAACATATAATTGCGGTGCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTCTGATATTGCAGAGATGGACCAAGGATGCAAAACTTGTGGCGGTGCAGTCGATGGGCGTGATTTGGGATTCTGTGCAACTGACGCAACACTGGTGCCTGATGGATTGGTACCGGAAAGTGTGCAAGATTGCATGTCACAACACTGAAAAGTTCCAGTTTGTAAGAGACATTGCCATGCTGATGCTGAAGCACTTCGAGAACGAAGATGCACGGGACACCCGTTTTCCACCTGAGGGGCCACCTACTGAGGATGGCAGAGGCCCGGCGCGGAATCCACCCAGGCGCAATACAAAGGGTAACGGTGCTCATGGTGGAAAGAAAACCCAGCGATGTCGTTTGTGCTGGGAGGTGGGACACAACAGGACGACTTGTCCAGTCCGCCGCACGATGGAGTCATCCAGTGCAGTTGCAGATGACATGGATTCGATGGACACTAACATGCTCTATGATAACCAATCCGGCGATGTGTATGCGACCGCCGAGATTCCTTCGTTCTAA 2397 0.5073 MSDGAEHGVGSFEGEGSAGMESDEYDFQEDETEHDHHAEADVDNRDAVELEDSLDGAGGMSDNYAEDEFYAVNSVESIGWIDFLNLSEEDVFWFNFADVDIAFEFYQKYAKHHGFGARRSRSEKRGEVRIRQEFVCHRQGYRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESRHWHVAYFSDAHNHHVLELRFSSMLPGHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAGGYHNVPYTTRDMHHVNAKQRREGVLDAESCLRYLRQCKTNDPALYYKEVVDGEGVLQYLFWCDGTSQINYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVIFAAALVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDRQMKSAIEQVFPEAHHRLCAWHLLRNATSNIGKPKFTRMLRDCMLGDYEVRTFQRKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFHRCLMFVRAKEVEADVECAKGDPVMTTNLKQLERSAAENYTHAIFYLFVPILDRACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVIATSDTREVRCTCMRMECFGVPCEHIIAVLVLNNVHEIPRSLILQRWTKDAKLVAVQSMGVIWDSVQLTQHWCLMDWYRKVCKIACHNTEKFQFVRDIAMLMLKHFENEDARDTRFPPEGPPTEDGRGPARNPPRRNTKGNGAHGGKKTQRCRLCWEVGHNRTTCPVRRTMESSSAVADDMDSMDTNMLYDNQSGDVYATAEIPSF* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1950 798 ProSiteProfiles Zinc finger SWIM-type profile. 590 626 IPR007527 GO:0008270
Ahy5g1950 798 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 95 684 IPR031052 GO:0006355
Ahy5g1950 798 PANTHER OS02G0262500 PROTEIN 95 684 - -
Ahy5g1950 798 MobiDBLite consensus disorder prediction 1 47 - -
Ahy5g1950 798 MobiDBLite consensus disorder prediction 30 47 - -
Ahy5g1950 798 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Ahy5g1950 798 MobiDBLite consensus disorder prediction 703 739 - -
Ahy5g1950 798 Pfam MULE transposase domain 313 407 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1950 Ahy-Chr5 88291252 88293734 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1950 MULE 1.80E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1950 - - ahf:112770447 1473.37