Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1928 ATGGTGGATAGGGATTCAAGCGGAGTAAACATGTCAATAGCAGCTTCTTCCATGTTTCCTGGCTTTAGGTTCTGTCCCACTGACCATGAGTTGATCTCTTATTACCTCAGAAAAAAATTGGATGGTGACGAGGACAGTGTTCAGATTATTTCCGAGCTTGAACTTTGCACCTTTGAGCCTTGGGATTTGCCTGAAAAATCGTTCATTAAATCAAACGATGAGTGGTTTTTTTTCTCGCGACGAGGGAGAAAGTATCCCAATGGTTCACAAAATAAAAGGGCTACTAAACATGGGTATTGGAAGGTCACAGGCAATGAACGACAGATAGAGTCTGGTCAAAATGTGATTGGTACCAAACGCACCTTGGTATTCCATGTCGGTCGAGCTCCTAAAGGCCAGAGAACTGAATGGATTATTCATGAGTACTGCATCAATGACAAATTTCAGGATTCTTTGGTGGTTTGTCGGCTCAAGAGAAACACAAAATTCCATGCTAGTGATAGTTCTAACAAAGCTTCACGCAAGAGTGGTGGTGGAGTCTCAGAAGGGGTTACAGTTCAAAGGAGCACTTGTGTGCCTATTCAAGATCGTTCTAATAAAGCTTCACGCAAGAGTAGTTGTGGAGTCTCAGAAGAGGTTACAATTCAAAGGAGCACTTGTGTGCCTATTCAAGATCGTTCTAACAAAGCTTCACGCAAGAGTAGTTGTGGAGTTTCGAAAGGGGTTACGGTTCAAAGGAGCCCTTGTGTGCCTATTCAAGATCGTTTTAACAAAGCTTCACGTAAGAATTGTTGTGGAGTCTCAGAAGAAGGGGTTACAATTCAAAGGAGCACTTATGTGCCTATTCAAGATAAAGAGGTTGGATGTAGTTCCAAGAAGGGTAACAATAATAATAGTTCTCCTTCTACTACTACCCAAATTGAATCCAGTCGTATAGTTGCCAATGAAGCCAATCCCAAAGCTTCTTCCGATCATTCTAAGGTGGTGGACGAAGTGGGTTATTATGCAGAGATCAACTTAGTTGATATCATCAACTTAGATGAAACAGCACTCTGA 1056 0.4186 MVDRDSSGVNMSIAASSMFPGFRFCPTDHELISYYLRKKLDGDEDSVQIISELELCTFEPWDLPEKSFIKSNDEWFFFSRRGRKYPNGSQNKRATKHGYWKVTGNERQIESGQNVIGTKRTLVFHVGRAPKGQRTEWIIHEYCINDKFQDSLVVCRLKRNTKFHASDSSNKASRKSGGGVSEGVTVQRSTCVPIQDRSNKASRKSSCGVSEEVTIQRSTCVPIQDRSNKASRKSSCGVSKGVTVQRSPCVPIQDRFNKASRKNCCGVSEEGVTIQRSTYVPIQDKEVGCSSKKGNNNNSSPSTTTQIESSRIVANEANPKASSDHSKVVDEVGYYAEINLVDIINLDETAL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1928 351 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Ahy5g1928 351 MobiDBLite consensus disorder prediction 287 309 - -
Ahy5g1928 351 MobiDBLite consensus disorder prediction 165 184 - -
Ahy5g1928 351 Gene3D NAC domain 27 165 IPR036093 GO:0003677|GO:0006355
Ahy5g1928 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 230 - -
Ahy5g1928 351 MobiDBLite consensus disorder prediction 170 184 - -
Ahy5g1928 351 MobiDBLite consensus disorder prediction 289 309 - -
Ahy5g1928 351 Pfam No apical meristem (NAM) protein 20 143 IPR003441 GO:0003677|GO:0006355
Ahy5g1928 351 ProSiteProfiles NAC domain profile. 18 160 IPR003441 GO:0003677|GO:0006355
Ahy5g1928 351 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 12 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1928 Ahy-Chr5 87976577 87978890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1928 6 168 NAC Transcription Factor Family AT2G27300 65.644 7.92e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy5g1928 NAM 7.70E-32 No_clan