Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1916 ATGGAGATAGAGGCAAGTAAACCTTCGGGGAATAATAATAATAATAACAATGGAGGAGGGGTGGTTCCGGCGTTGAGTCCTCTGAGTGAGACTCTTTGGAGGGAGAAGACGGACACGGAGTTCATTGGAGACGTATCGGCCAGGCTGACGTGGAAGGATCTGACGGTTATGGTCACTCTCAGCAACGGAGAGACGCAAAATGTTCTAGAAGGTTTAACGGGTTATGCTGAGCCTGGAACCTTCACTGCACTCATGGGCCCCTCCGGCTCCGGAAAATCCACTCTCCTCGACGCTCTTTCCAGTCGCCTTGCCGCCAATGCCTTCCTCTCCGGCACCATCCTCCTCAACGGTCGCAAAGCCAAGCTCTCCTTCGGCACCGCCGCTTACGTGACACAAGATGACAACTTAATTGGGACCCTAACAGTAAGAGAGACGATATCATATTCAGCAAGGCTGCGGTTGCCAGATAAGATGGCAAGGTCGGACAAAAGAGCATTGGTTGAGAGCACGATAGTGGCGATGGGGCTTCAAGATTGCGCTGACACAGTGATAGGGAACTGGCACCTGCGTGGGATCAGTGGTGGGGAGAAGAGAAGGGTTAGCATTGCATTGGAAATATTGATGAGGCCTAGGTTGCTCTTCCTTGATGAACCTACTAGTGGCTTAGACAGTGCTTCGGCTTTCTTTGTGACTCAGACACTGCGTGCATTGGCAAGAGATGGAAGAACAGTAATAGCTTCCATTCATCAACCAAGCAGTGAAGTGTTTGAACTCTTTGATCAATTGTACTTGCTCTCTGGTGGCAAAACTGTTTACTTTGGCCAAGCGTCTGAGGCATACGAGTTCTTTGCACAAGCTGGTTTTCCATGCCCTGCTTTGAGGAATCCATCAGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAATCAACTCTTAAGGGGTCCATGAAACTCAGGTTTGAGGGAAGTGATGATCCCTTGGATAAGATCACTACTGCTGAAGCTATCAGGACTCTTATTGATTACTACCGCACTTCTCAGCATTCTTATGCTGCAATACAGAAAGTGGATGAGATATCCAAAGTTAAAGGAACAGTGCTTGATGCAGGGGGAAGCCAAGCTAGCTTCTTAATGCAGTCTTACACGTTAACAAAGCGCTCCTTCATCAACATGTCTAGGGACTTTGGTTACTATTGGCTTAGGCTTGTGATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACGTGGGAACAGGCTACAATTCAATTCTGGCTAGAGGCTCATGTGCATCATTTGTGTTTGGTTTTGTCACATTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAAAGACTGAATGGGCACTATGGTGTGACTGCATTTGTGATAAGCAACACATTATCTGCAATGCCATTCCTGATACTAATAACTTTTCTGTCTGGAACAATCTGTTACTTCATGGTTAGGCTTCACCCTGGTTTTTGGCATTACCTCTTCTTTGTGCTGTGCCTTTATGCAAGTGTCACAGTTGTTGAGAGCTTAATGATGGCAATAGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATAATTGGAGCAGGGATTCAGGGAATATTCATGCTGGTGTCTGGCTACTTTAGGCTTCCACATGATATTCCAAAGCCAGTCTGGCGCTATCCAATGTCATACATCAGTTTCCATTTTTGGGCACTACAAGGACAATACCAGAATGATCTAACTGGCTTGATATTCGACAACCAGACGCCGGATCTTCCAAAGATACCGGGCGAATACATCCTAGAGAATGTTTTCCAGATTGATGTGAACAGATCAAAGTGGATAGACCTAAGTGTGATCTTCAGCATGATTATAATCTACCGCATAATTTTCTTCATAATGATCAAGATCAATGAGGATGTGACACCATGGGTTAGAGGGTACATTGCCAGGAGAAGGATGCAGCAGAAGAGTGGAACTCAGAACACAACTATTGCACCTGATGTTCTTGCTCACTCACCATCTCTTAGAGCCTATGTTTCTACTCAAAGAAGAAATGGCACTTCCAAAAGTTGA 2115 0.4539 MEIEASKPSGNNNNNNNGGGVVPALSPLSETLWREKTDTEFIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMARSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQHSYAAIQKVDEISKVKGTVLDAGGSQASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLTGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLSVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSGTQNTTIAPDVLAHSPSLRAYVSTQRRNGTSKS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1916 704 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 292 IPR003439 GO:0005524
Ahy5g1916 704 CDD ABCG_EPDR 46 274 - -
Ahy5g1916 704 Gene3D - 43 287 IPR027417 -
Ahy5g1916 704 MobiDBLite consensus disorder prediction 1 22 - -
Ahy5g1916 704 Pfam ABC-2 type transporter 382 588 IPR013525 GO:0016020|GO:0140359
Ahy5g1916 704 Pfam ABC transporter 71 220 IPR003439 GO:0005524
Ahy5g1916 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 286 IPR027417 -
Ahy5g1916 704 MobiDBLite consensus disorder prediction 1 23 - -
Ahy5g1916 704 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524
Ahy5g1916 704 PANTHER OS04G0528300 PROTEIN 15 694 - -
Ahy5g1916 704 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 15 694 - -
Ahy5g1916 704 SMART AAA_5 78 249 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1916 Ahy-Chr5 87446479 87451849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1916 79 253 Calmodulin-binding Proteins AT2G36910 33.871 1.22e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1916 K05681 - gmx:100803731 1267.29