Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1898 ATGGGGTGTTCAGTTCCTTCATTACTTCTTCATCTCTTCTCTCTCGTAATGTTTTTGGTTTTCAACCCACCATGTGTTTGTGGAAATGTCGAAGATGATGAGCTTAAATCACTGTTGGACTTGAAGGCTGCTTTGGATCCGGACAACACCTATCTCTCATCTTGGACCATGAATGGCAACCCTTGTGGTGGTGGTTCCTTTGAAGGTATTGCTTGCAATGATCAAGGTCAAGTTGCAAATATTTCTCTGCAAGGGAAAGGTCTCTCTGGGAAGCTTTCATCTTCCATTGCTGGACTTAAGCACCTTACAGGACTCTACTTGCATTATAACTCATTATCTGGCGACATACCTAAGGAGATTGCAAACTTGACTCAGCTCAGTGATTTGTATCTGAATGTTAATCATCTTTCTGGGGAAATCCCTTCTGAGATCGGCAAGATGGAGAACCTCCAAGTTTTGCAGCTTTGTTACAATCAGTTGACAGGAAGCATACCTACACAGCTTGGTGATTTGAAAAAGCTTAGTGTTCTTGCTTTGCAATCGAACGAGTTAACAGGTGCAATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGACTAGATTTGAGCTCTAATAAGCTCTTTGGTTCCATTCCCTCTAGACTAGCTGATGTTACTTCACTGCAAGTTCTGGATGTTCACAACAATACGCTCTCTGGGAATGTACCTCCTGCTCTTAAGAGACTGGAATATGGATTTGTGTATGAATCAAATGCGGGGTTATGTGGAGTTGGGTTTTCATCCTTGAGAGCTTGCAATGATTCGGATCATGTCAACCCCAATAGACCTGAACCCTATGGGGCAGGAGTTAATGGTCTATCTAGAGATATCCCAGAAACTGCAAATGTAAAGTTGCCTTGCAATGGAACTCGGTGCCAAAGTTCATCAAAATCCAAGCACACATCTGTTACGGTTGGCATAGTTCTGGTTATGATTGCAGTATCAGCAATTGGACTTCTGACCTTTACATTGTACCGTCGACGGAAACAAAAGCTTGGAAATGCTTTTGATATCTCCGAGAGCCGCCTAAGTACTGATCAAACCAAGGGTATATATAGGAAAAACGGTTCTCCTCTAGTGAGCCTTGAGTATGCCAATGGATGGGACCCTTTAGCTGATAGCAGGAATTTCAATGGAGATAGCCAAGATATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTAGAGTCGGCAACTCAGTATTTCTCAGATATGAATTTGTTAGGTAAGAGCAACTTCAGTGCAACATATAAAGGAGTTTTGAGAGACGGGTCTGTTGTTGCTGTTAAGAGCATCAGTAAAACTAGCTGCAAATCAGATGAAGCTGAATTTTTGAAGGGCCTGAACACTTTGACCTCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGCTGTTCAAGGGGACGAGGTGAATGCTTCCTTGTCTATGATTTTGTGCCTAATGGAAATCTGACGCGCTACCTAGATGTGAAGGAGGGTAACGGAGAAATCCTGGAATGGTCAACTAGAGTTTCTATTGTGAAAGGCATTGCCAAAGGTATAGCATATCTACATGCATACAAGGCAAACAAACCGGCTCTTGTTCACCAAAACATCTCTGCGGAGAAAGTACTTGTCGATCAGCGATACAACCCGCTGCTTTCAGATTCCGGCCTGTACAAGCTTCTCACTAATGACATCGTTTTCTCTGCATTAAAGGCCAGTGCTGCCAAGGGTTATTTGGCTCCTGAGTACACAACTACAGGCAAATTTACAGAGAAAAGCGATGTGTATGCTTTCGGGGTGCTTCTTTTCCAGATCCTCACAGGGAAGCAGAAGATAACTTGCTCGTTACGCCTTGCCGTGGAATCCTTCAAGTTCGAAGAATTCATCGACCCGAATTTGCATGGCAGATTCTTTGAATACGAGGCTGCTAAACTCGCAAAGATGGCTTTGCTTTGCTCCCAAGAGTCTCCCTTCGAGAGGCCAACAATGGAAGCCATTGTTCAAGAACTCAGCAACTGTAGTAGCTGTCTCTGA 2067 0.4344 MGCSVPSLLLHLFSLVMFLVFNPPCVCGNVEDDELKSLLDLKAALDPDNTYLSSWTMNGNPCGGGSFEGIACNDQGQVANISLQGKGLSGKLSSSIAGLKHLTGLYLHYNSLSGDIPKEIANLTQLSDLYLNVNHLSGEIPSEIGKMENLQVLQLCYNQLTGSIPTQLGDLKKLSVLALQSNELTGAIPASLGDLGMLMRLDLSSNKLFGSIPSRLADVTSLQVLDVHNNTLSGNVPPALKRLEYGFVYESNAGLCGVGFSSLRACNDSDHVNPNRPEPYGAGVNGLSRDIPETANVKLPCNGTRCQSSSKSKHTSVTVGIVLVMIAVSAIGLLTFTLYRRRKQKLGNAFDISESRLSTDQTKGIYRKNGSPLVSLEYANGWDPLADSRNFNGDSQDMFQSFRFNLEEVESATQYFSDMNLLGKSNFSATYKGVLRDGSVVAVKSISKTSCKSDEAEFLKGLNTLTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLTRYLDVKEGNGEILEWSTRVSIVKGIAKGIAYLHAYKANKPALVHQNISAEKVLVDQRYNPLLSDSGLYKLLTNDIVFSALKASAAKGYLAPEYTTTGKFTEKSDVYAFGVLLFQILTGKQKITCSLRLAVESFKFEEFIDPNLHGRFFEYEAAKLAKMALLCSQESPFERPTMEAIVQELSNCSSCL* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1898 688 SUPERFAMILY Protein kinase-like (PK-like) 392 681 IPR011009 -
Ahy5g1898 688 Gene3D Transferase(Phosphotransferase) domain 1 495 687 - -
Ahy5g1898 688 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Ahy5g1898 688 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 686 - -
Ahy5g1898 688 Pfam Protein tyrosine and serine/threonine kinase 420 681 IPR001245 GO:0004672|GO:0006468
Ahy5g1898 688 Gene3D Ribonuclease Inhibitor 150 259 IPR032675 -
Ahy5g1898 688 SMART serkin_6 416 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1898 688 Gene3D Ribonuclease Inhibitor 33 147 IPR032675 -
Ahy5g1898 688 SUPERFAMILY L domain-like 34 242 - -
Ahy5g1898 688 CDD TM_EGFR-like 312 345 - -
Ahy5g1898 688 Gene3D Phosphorylase Kinase; domain 1 386 494 - -
Ahy5g1898 688 Pfam Leucine rich repeat 149 208 IPR001611 GO:0005515
Ahy5g1898 688 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 686 - -
Ahy5g1898 688 ProSiteProfiles Protein kinase domain profile. 416 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1898 Ahy-Chr5 87242203 87246208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1898 7 529 Miscellaneous Gene Families AT4G22730 55.056 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Ahy5g1898 PK_Tyr_Ser-Thr 2.00E-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1898 - - gmx:100789253 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3388 15 156368252 156372276 Ahy5g1898 5 87242203 87246208 hybridization
Ahy5g1898 5 87242203 87246208 Ahy19g1924 19 111429366 111432652 PCT
Ahy5g1898 5 87242203 87246208 Ahy9g1561 9 84272934 84276163 PCT
Ahy19g1924 19 111429366 111432652 Ahy5g1898 5 87242203 87246208 PCT
Ahy9g1561 9 84272934 84276163 Ahy5g1898 5 87242203 87246208 PCT