Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1878 ATGAATATGAAAGAAGTTGTTGTTGTTCCTCATCTTGTTCTGTTTCTCTTCTTTGCCTTTGGATTGGCACTTTCAGTCTCTGAGTCCAAAATTATTCCTCATGCTGCTGATGATTCTTTCAGTGTTGGCTATATTCAGATGAGGAGTGCAAAGAATTGTTCTTACTTGGTAACAATAAATACAAGTTGTTCTTCACCAAAGTTTACTACAGATCAGATTAGTATTGTCTTTGGAGATGCTCATGGCAACCAGGTATTTGCACCAAGATTGGATGGTTATCCAATATCAGAGACATTTGGACAATGTGCCTCAGACACATTCCATAGAGAGGGTCCATGCACACAAAACATATGTTTTGCATACCTAAGAAGATGTGGTTCCAATTTTAAGGGTTGGATGCCTCAAACTGTCCAAATCTATTCCCAACACTTAGAACATCATGTTACTTTCAATTTCAACACTTTCATTCCCAATGACACTTGGTATGGTTATAATTTCTGCCAAACGCCGCCTCCGCCACCTCCTGTTCCTCCTCATGAAGATTCTCCTCCACCACCAACGTCGCCGCCACCACATCCTCCTCATCATGATGAGCCTCCTCCTCCACCTCCACATTATCATTCTCCCCCGCCACCATCACCATCACCTCCACCTCCTTCTCAACCTCCTCCACCACCACCATCACCATCACCTCCTCCCCCATCTCCTCCCCCTCCACCACCATTACTGCCTCCTCCTCCTCCTCCTGCACCGTCTTCTTCAAACCATTTGTGCAATCAAAATTGGATTATATACTTGGTTGTAGGACTTGTTCTTAGTATAATTTGGATGTAG 834 0.4376 MNMKEVVVVPHLVLFLFFAFGLALSVSESKIIPHAADDSFSVGYIQMRSAKNCSYLVTINTSCSSPKFTTDQISIVFGDAHGNQVFAPRLDGYPISETFGQCASDTFHREGPCTQNICFAYLRRCGSNFKGWMPQTVQIYSQHLEHHVTFNFNTFIPNDTWYGYNFCQTPPPPPPVPPHEDSPPPPTSPPPHPPHHDEPPPPPPHYHSPPPPSPSPPPPSQPPPPPPSPSPPPPSPPPPPPLLPPPPPPAPSSSNHLCNQNWIIYLVVGLVLSIIWM* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1878 277 MobiDBLite consensus disorder prediction 172 253 - -
Ahy5g1878 277 PANTHER - 11 172 - -
Ahy5g1878 277 Gene3D PLAT/LH2 domain 47 162 - -
Ahy5g1878 277 CDD PLAT 53 169 - -
Ahy5g1878 277 Pfam Embryo-specific protein 3, (ATS3) 46 167 IPR010417 -
Ahy5g1878 277 PRINTS Proline rich extensin signature 200 212 - -
Ahy5g1878 277 PRINTS Proline rich extensin signature 170 186 - -
Ahy5g1878 277 PRINTS Proline rich extensin signature 213 234 - -
Ahy5g1878 277 PANTHER EMBRYO-SPECIFIC PROTEIN 11 172 - -
Ahy5g1878 277 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 51 164 IPR036392 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1878 Ahy-Chr5 86943727 86946284 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1878 - - ahf:112751674 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3407 15 156552471 156554850 Ahy5g1878 5 86943727 86946284 hybridization
Ahy19g3464 19 157353740 157355014 Ahy5g1878 5 86943727 86946284 PCT
Ahy9g2168 9 110621834 110623060 Ahy5g1878 5 86943727 86946284 PCT