Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1875 ATGGTTTCCAAGGCGGAGAACGTTTTCCATGGAAACAGCAATGGCAATAGTGTTAGTATTGATGAGTTGTTCAAAGCTCAAGCTCACCTGTATAGAGTCATGGCAAGTTACACCTTACCCATGTGTGTCAAGTGGGCTATCGACCTTTCCATACCAAACATCATCCATAACCGCCATTCCCATTCCATTTCCCTCTCCGATCTCGTGTCGGCTCTTAACGCTCCACCACCAAAAACTCAATATGTCCAGCGCATCATGCGCTTGTTGACACACGACGGTATATTTGCCGTCGTGGTCAACGAAGAAAGTAAAGAAGAAGAATATGTTCTTACTCCCACTTCTGAGCTCCTTGTAAAGGGCACTGATCATTGTGTCTCGGCCATGGCCGAGTACATTATTAACCCAACTACGGTCGGATTTTATAATTATTTGGCTAAATGGACTTGCGACGAGAAGGGACAAACAACTGTTGAAACTGCTTTAGGGTCTTCCGCTGGCTACTGGGATTTCATTCATGAAAATCCTAAGGAGTTGAAGATTTTCAACGATGGTATGGAGAGTGATTCTAACGTTGTGAGGTTTGCTTTGAGGGATTGTAAATCGGTGTTTGAAGGGTTGGATTCGTTGGTTGATGTTGGTGGGGCCACTGGTAACACTGCTAAGATCATTTGTGAAGCGTTTCCGAAGCTGAAATGCAGAGTGTTGGATCTTCCACATGTTGTTGCTGGTTTGCCTGAAACTGAAAACTTGAAATTTTTTGGAGGGAGCATGTTTGATTTTATCCCTCATGCTGATGCTATTTTATTCAAGTGGGTTCTGGGCAATTGGAGTGATGATCATTGCATACAAGTCCTAGAAAAATGTAAGGAAGCAATTTCAGGCAAAAGTGGCGGAGGAAAAGTGATTATTATTGACATAGTAATAAATGAAAATGAAGATGAGCATGATGTAATGGAACTAAAACTATTTTCTGATATAGCTGCAATGACTCTTCTTGATGGAAAAGAGAGAGACGAGAAAGATTGGAAAAAACTCTTCTTGAAAGCAGGCTTCAAGAACTACAAAGTGTTTTCCATATTTGGCTTTAGGTCGCTTATTGAGGTTTATCCTTAA 1113 0.4151 MVSKAENVFHGNSNGNSVSIDELFKAQAHLYRVMASYTLPMCVKWAIDLSIPNIIHNRHSHSISLSDLVSALNAPPPKTQYVQRIMRLLTHDGIFAVVVNEESKEEEYVLTPTSELLVKGTDHCVSAMAEYIINPTTVGFYNYLAKWTCDEKGQTTVETALGSSAGYWDFIHENPKELKIFNDGMESDSNVVRFALRDCKSVFEGLDSLVDVGGATGNTAKIICEAFPKLKCRVLDLPHVVAGLPETENLKFFGGSMFDFIPHADAILFKWVLGNWSDDHCIQVLEKCKEAISGKSGGGKVIIIDIVINENEDEHDVMELKLFSDIAAMTLLDGKERDEKDWKKLFLKAGFKNYKVFSIFGFRSLIEVYP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1875 370 PIRSF O-mtase 9 370 IPR016461 GO:0008168
Ahy5g1875 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 369 IPR029063 -
Ahy5g1875 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 370 IPR016461 GO:0008168
Ahy5g1875 370 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 14 369 - -
Ahy5g1875 370 Pfam Dimerisation domain 41 90 IPR012967 GO:0046983
Ahy5g1875 370 SUPERFAMILY "Winged helix" DNA-binding domain 21 121 IPR036390 -
Ahy5g1875 370 Gene3D Vaccinia Virus protein VP39 118 370 IPR029063 -
Ahy5g1875 370 Pfam O-methyltransferase domain 141 352 IPR001077 GO:0008171
Ahy5g1875 370 PANTHER O-METHYLTRANSFERASE 14 369 IPR016461 GO:0008168
Ahy5g1875 370 Gene3D - 12 117 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1875 Ahy-Chr5 86915428 86918961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1875 32 368 Monolignol Biosynthesis Gene Families AT5G54160 31.304 4.00e-41 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1875 K22588 - gmx:100819853 361.688