Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1866 ATGGCGAATCAAGAAGTGGGAAAGAAGGTGCGAATGGCATTGACTCCACCACCTCATGATGCAACAACAAATCCGTTTCTACTAATAAGATCTATCAGCAGCAGCAATAATGCCATGCTCTCTAAAGAAGAAGAAGAAGAGAAGGAGAATAATAATGGGGAGCCACATACCAATAATTTGTGTGCCGTGATTAATCACTATATCCACACTCTCAATCACTTTAACTTGCGAAACTTGGGCTACCCCCTTAATCAGAATTTCAACTACGATGCATTGGCACCATTGCTACGATTTCACCTGAACAATGCGGGTGATCCATTTTTTGGAAGCACCGTGTGCCTAAATTCAACATCATTTGAAGTTAGTGTGCTTGATTGGTTTGCAAATTTGTGGGAGATACAAAACAACAAGTACTGGGGATACGTCACCACTGGTGGAACTGAAAGCAATCTTCACGCCATTTTATTAGGGAGAGAAAAATTTCCTGATGGAATTCTATATACTTCACAAGATTCACATTATTCAATATTCAAAATTGCAAGAATGTACCGAATGCAATGTGTTAAAGTTGGAACTTTGGTCTCCGGTGAAATTGATTGCGCTGAACTAAAAACTTCATTACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTTAACATAGGTACAACAATGAAAGGAGCTGTTGATGATATTGATCTTGTAATACAAACATTGAAAAAAAATGGTTTCAGTCGTGATCGATTTTACATTCACTGTGATGGAGCTCTATTTGGTATCATGCTCCCCTTTGTCAAACAAGCACCAAAAATAAGTTTCAAGAAACCAATCGGAAGTGTGTGTGTTTCTGGACATAAATTCTTAGGATGCCCAATTCCATGCGGAGTTGTAATAACTCGTAAAGAATATATTAATACATTATGTAGAGACATAGAATACATTGGTTCAAGGGATGCAACAATCACAGGTAGCCGATCTGGACATGCTCCAATCTTCCTTTGGTATGCTATCACTAAAAGAGGTTCATTGGGGCTTCAAAAAGAAGCTCAAACTTGCATAAGGAATGCACGTTACTTACATAATCGATTGCGTGAGGCAAGAATTGGTGCAATGTTAAATGAGTATAGCAACATTGTTGTGTTTGAGAAGCCTCTTGACGATGAATTTAGCCGTAGGTGGAGTTTGGCATGCAAAGGGAACATTGCACACGTCGTGGTCATGCAGCACGTTACCATTGAAATGTTGGATTTGTTTGTTGCTGAGTTTCTTCAAAAACGATCTTTTTGGTGGTTCAAGGATTATGGATCTTCTTTTCAGCCTCGCTGCATTGCAGATGAAATTGGTGCTGCAAATTGTTCTTGCTCAATGCACAGTTTGTTATCGTGA 1386 0.3925 MANQEVGKKVRMALTPPPHDATTNPFLLIRSISSSNNAMLSKEEEEEKENNNGEPHTNNLCAVINHYIHTLNHFNLRNLGYPLNQNFNYDALAPLLRFHLNNAGDPFFGSTVCLNSTSFEVSVLDWFANLWEIQNNKYWGYVTTGGTESNLHAILLGREKFPDGILYTSQDSHYSIFKIARMYRMQCVKVGTLVSGEIDCAELKTSLLAHKDKPAIINLNIGTTMKGAVDDIDLVIQTLKKNGFSRDRFYIHCDGALFGIMLPFVKQAPKISFKKPIGSVCVSGHKFLGCPIPCGVVITRKEYINTLCRDIEYIGSRDATITGSRSGHAPIFLWYAITKRGSLGLQKEAQTCIRNARYLHNRLREARIGAMLNEYSNIVVFEKPLDDEFSRRWSLACKGNIAHVVVMQHVTIEMLDLFVAEFLQKRSFWWFKDYGSSFQPRCIADEIGAANCSCSMHSLLS* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1866 461 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 279 300 IPR021115 GO:0016831
Ahy5g1866 461 Gene3D - 97 337 IPR015421 GO:0003824
Ahy5g1866 461 SUPERFAMILY PLP-dependent transferases 71 423 IPR015424 -
Ahy5g1866 461 Gene3D Aspartate Aminotransferase, domain 1 338 426 IPR015422 GO:0003824
Ahy5g1866 461 Pfam Pyridoxal-dependent decarboxylase conserved domain 116 371 IPR002129 GO:0016830|GO:0019752|GO:0030170
Ahy5g1866 461 PANTHER - 46 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1866 Ahy-Chr5 86809127 86813455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1866 221 366 Calmodulin-binding Proteins AT3G17760 28.947 2.92e-07 50.8