Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1827 ATGGCAGAAGGTGCTGAAGAATTTGTACAACAGACGAACTCACCCAGTGAAATTGTTGCCAGTCAATCAATTTCTGAGAATATAGAAAACTACACTAGCTCTGATGAGGTCATAAACCAAGCCATTGGTGACGAGGAGGTAGATCCCGAGGTGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGAACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACCATAAACGATCAGAGGGTGGTTGTTAATCAAGCTTTGCATTGTAACAGAGATGGATACCGCACATCCCGTGTAAAGGCACCCCAGAGAAGGAAAACAGTGGCCTCAACAAACTGCAAAGCCCGTTGCTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGAATTTCTCGAGTAGAGGTATCTCACTCACACCCGCTTAATCCGAAGCTATCTGGCATGTTCTCAGCAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTGGCATTAGACCGAGTAAGACGTACCAGGCACTAGCCAATGCAGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCGTCACTTACGCATTTCCGGGGATGAGACGGATCCAAAAGAGTTACTTAAGCACTTCTCACGGATGAAGGAGCTCAATCCAAGCTTTTTCTTTGAAATAGATGTGGATGAAAACCATAGCATTAGAAATGTGTTTTGGGCCGATGCTCGGTGTAGAGCTGCATGGGAATATTTTGGTGATGTCGTGACGTTTGACACTACTTACAAGACTAATAGGTACGACGTGCCGTTTGGGTCTTTCGTAGGTGTCAACCACCATGGGATGTCTACGCTTCTTGGGTGCGCATTATTGCGGAATGAGGACACTCATATGTTTGCTGACCGACACATGTGGGTGCCAGTATTTTTCAAGGATGAATTCTGGGCTGGCATGAGGAGCACACAGCGTAGTGAGAGCATGCATTCAGTTTTTGATAAGTACTTAAATAGTAAGAGCTCTTTGTTGCAATTTGTTCGCCAATACCAAAACTGTGTTATAGACAAGGAGCAAAAGGAGCTTGAGTGTGACGCTGCTGATTTAAGGGGTATTATCCCTTGTGTTTCCAGCTCACCAATAGAGAAGCAGTTCCAGAGAGAATATACAAACTCCATGTTTCGAGACGTTCAGGATCAATTTATAAAAAAGGCCGATTGTGACATCTCCTTAATCAACCATCATGGCACAAGTATAGTTTGTGAAGTTGACCAACAAAAGATGGTGTTTGACATGTCAGTGTACATCAGATACCAAGTCGTGTATTGCTCGCAATCATCAGACGTTCAATGTGATTGCTTTATGTTCCAATCGAATGGTATTCTATGCTGCCACAGTCTTGCTGTTCTTCTACATTTTCGTGTGACATCAGTGTCCTCACAATACATTCTATCCCGATGGAGTAAGAATGTTAGTCGGAGACACACATACATCAGGAGTAGCATTGACATGGACCGTTCTGATGAAAGCATGACAATTTTTAGGCAATTGTGTTCTGATTTTTACAACATCGCTCAGGATTTTGTGGCTACTCCAGAGGTTGCTGCTATATTGCGTGGTGCCATGGACAGTGCTCGGGAGAAGCTCAGAGAACACAAGGAATTCGAGCATCAAGCTGCACATGTACCAAGTGCGATTTACTCACATACGCATGATGAGTGTCCCGTTAGCATGGATGAGCTACATGGCCCACGTCGTGTTCCTACGCGAGGTCGTCCAACTTCCACCAGACTTGGGGTAGATCTGGAAAAATCTATTAAGAAGAGGGCACGCAAAAACAAGAACACTCACAATCACAATAAGGAAACATTCTTGGAGGATTCGAAGTTTAACATCACTACATATCATAAGCATTAG 1965 0.4422 MAEGAEEFVQQTNSPSEIVASQSISENIENYTSSDEVINQAIGDEEVDPEVGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETINDQRVVVNQALHCNRDGYRTSRVKAPQRRKTVASTNCKARCYLALDKMTGQWRISRVEVSHSHPLNPKLSGMFSANRQLSMHVKDLIQQNDQAGIRPSKTYQALANAVGGPANLTFTEKDVRNYISRHLRISGDETDPKELLKHFSRMKELNPSFFFEIDVDENHSIRNVFWADARCRAAWEYFGDVVTFDTTYKTNRYDVPFGSFVGVNHHGMSTLLGCALLRNEDTHMFADRHMWVPVFFKDEFWAGMRSTQRSESMHSVFDKYLNSKSSLLQFVRQYQNCVIDKEQKELECDAADLRGIIPCVSSSPIEKQFQREYTNSMFRDVQDQFIKKADCDISLINHHGTSIVCEVDQQKMVFDMSVYIRYQVVYCSQSSDVQCDCFMFQSNGILCCHSLAVLLHFRVTSVSSQYILSRWSKNVSRRHTYIRSSIDMDRSDESMTIFRQLCSDFYNIAQDFVATPEVAAILRGAMDSAREKLREHKEFEHQAAHVPSAIYSHTHDECPVSMDELHGPRRVPTRGRPTSTRLGVDLEKSIKKRARKNKNTHNHNKETFLEDSKFNITTYHKH* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1827 654 PANTHER OS03G0843700 PROTEIN 315 529 - -
Ahy5g1827 654 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 317 IPR031052 GO:0006355
Ahy5g1827 654 Pfam FAR1 DNA-binding domain 64 153 IPR004330 -
Ahy5g1827 654 SMART 26again6 465 492 IPR006564 GO:0008270
Ahy5g1827 654 Pfam SWIM zinc finger 461 488 IPR007527 GO:0008270
Ahy5g1827 654 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 315 529 IPR031052 GO:0006355
Ahy5g1827 654 ProSiteProfiles Zinc finger SWIM-type profile. 454 490 IPR007527 GO:0008270
Ahy5g1827 654 PANTHER OS03G0843700 PROTEIN 20 317 - -
Ahy5g1827 654 Pfam MULE transposase domain 273 318 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1827 Ahy-Chr5 79252342 79256200 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1827 FAR1 8.10E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1827 - - adu:107493576 1171.76