Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1804 ATGAACCAGCAGGACGAGAAAGCCACCATGGATCTTGTTCCACCCTCTGAGCACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGATACCATGCAAGAGGCTGCTGGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCGTTTCTGAGCACCAGGCCCCCTCCACCTCCAGCCCCTTTCTCTCACACCCATCAAACCACCACCATTGATCACACTCTCACTCTCCAGGGTTTCTACGGTGATTCGAAGAAGGGGCAAGGATCATCTTCATCGTCCTCACCAACTACATCAAACGAATCAGTCTCCCCTAAAGCAGCACCTTTTGTTGTCAAACCACCTGAGAAGAAGCACCGTCTTCCATCTGCATACAACCGTTTCATGAAAGAGGAGATTCAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTGGGCAAGGTTCATTCCAAATTCGCCTACAAGCTCAGTTGCTGCAAGTAAAAACAATGAATGA 546 0.5018 MNQQDEKATMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPPPAPFSHTHQTTTIDHTLTLQGFYGDSKKGQGSSSSSSPTTSNESVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPTSSVAASKNNE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1804 181 MobiDBLite consensus disorder prediction 85 124 - -
Ahy5g1804 181 CDD HMGB-UBF_HMG-box 126 162 - -
Ahy5g1804 181 PANTHER PROTEIN CRABS CLAW 8 180 - -
Ahy5g1804 181 PANTHER PROTEIN YABBY 6-RELATED 8 180 IPR006780 GO:0007275
Ahy5g1804 181 Gene3D High mobility group box domain 104 169 IPR036910 -
Ahy5g1804 181 SUPERFAMILY HMG-box 110 163 IPR036910 -
Ahy5g1804 181 MobiDBLite consensus disorder prediction 85 111 - -
Ahy5g1804 181 Pfam YABBY protein 15 165 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1804 Ahy-Chr5 73266166 73268320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1804 5 179 C2C2-YABBY Transcription Factor Family AT1G69180 61.798 8.04e-65 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy5g1804 YABBY 1.40E-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1804 K25796 - gmx:100819079 275.018