Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1744 ATGGATTTCGACCTTTACTCAAGCGATAATGATGAAGAGTCATCAGAGATGTCGTTGGGTGTGTGTGGTTCTTCAGGGTCCTCTGATGACGACGACAGTACTAGCTTATTTGGCATAGGAACAAGTCACTCGGAATCGAACAAAGAATCGCATCGCTCAGAAGGGGATGTTCACGGCAAGGTGCCTGTGTTACTTACCGCAGAGGACTTCTTGCATACAGTTTTCACTTCTGAGGAGGAGGCCTACAATGCTTACAAGGAGTTTGCCTGGACAAGGGGGTTTGGTGTTTGCAAGGGGGATGTGGGACGGGTTGACGGTGTTTTAGTGAGGCGGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATAGGCCAGAACGAGTAAGGGAGGAGCGGCTGGAGAGTCGCACGGACTGCAAGGCAAAATTGAAAATATACTATGATGTGCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACGACATGGCTCCGGCTGAGTTTTGCAACCTGTTGCCAAGTCACCGAAAAATGAGCGACGGGGATAAGGCTCAAGTGAATAGCATGAAGCAATTTGGAATTCCTACCTCGAAAATAATGGCTTACATGGCAGGCCAATCGGGTGGCTACAGCATGCTTCGGTTTACAAAAAGGGATTTGTACAATTATGTTCACAGTCAACGCCGAGCACGAATCTTGGATGGGGATGCAGCTGCAACTATAAGCTACCTAGAGGGGAAGGCAAATGCGGACCTTATGTCAGTCGCCAGATACACAACGACTGTAGATAATCGGTTGGGTAGCTTATTTTGGGTGGACGGTATCATGAAATCCGATTATGAGTTGTTTGGTGATGTCCTTGCATTTGACGCGACATACCGTGGGAACAAGTACAAGAAACCTCTGGTGGTGTTCTCTGGGACAAATCATCACAGGCAAACTTGCATTTTTGGATTTGCCTTGCTTCAGGATGAGGAGGTGCGCACCTACAAATGGGTTCTGCTGAACCTTTTGGATGTCATGGGTCAAAGAAGACCGAACCTTGTTCCGAAACCGACGCGGTTTAGTGTTGTGGTGCGGATGTGCTGCTAA 1116 0.4785 MDFDLYSSDNDEESSEMSLGVCGSSGSSDDDDSTSLFGIGTSHSESNKESHRSEGDVHGKVPVLLTAEDFLHTVFTSEEEAYNAYKEFAWTRGFGVCKGDVGRVDGVLVRRDIFCHRQGTRSDKHYDRPERVREERLESRTDCKAKLKIYYDVHDNVWRVRKIIDEHNHDMAPAEFCNLLPSHRKMSDGDKAQVNSMKQFGIPTSKIMAYMAGQSGGYSMLRFTKRDLYNYVHSQRRARILDGDAAATISYLEGKANADLMSVARYTTTVDNRLGSLFWVDGIMKSDYELFGDVLAFDATYRGNKYKKPLVVFSGTNHHRQTCIFGFALLQDEEVRTYKWVLLNLLDVMGQRRPNLVPKPTRFSVVVRMCC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1744 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 355 IPR031052 GO:0006355
Ahy5g1744 371 Pfam MULE transposase domain 294 355 IPR018289 -
Ahy5g1744 371 MobiDBLite consensus disorder prediction 12 44 - -
Ahy5g1744 371 MobiDBLite consensus disorder prediction 1 57 - -
Ahy5g1744 371 PANTHER OS02G0262500 PROTEIN 69 355 - -
Ahy5g1744 371 Pfam FAR1 DNA-binding domain 85 172 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1744 Ahy-Chr5 59952475 59953590 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1744 FAR1 3.60E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1744 - - adu:107478961 538.11