Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1741 ATGGACTTGACCCCAATTGATGCAAGCACCACCCACACCCAAACCCAAACCATAGAACACACAAACTCACAACAAACACAAACCCCACCACAACCAACAACGAACGGTTCCCTCAAACGCCACCACCCGCTCCCGACCACCGCTATTGCGGCCGCACCACCACTCTCCATGGTAATTTCCTACAAGGAGTGCCTCAAGAACCATGCAGCCACCATCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCCTCCTCCTCCTCCAACCCCTCTGAGCCACGCTCCCTCACTTGCGCCGCATGTGGCTGCCACCGCAACTTCCACCGCCGCGACCCAGAATCCCTCCTCCCCCACCACCACCACCACCACCCAAACTTCCTCAGCTTCTACCACCACTCATCATCGCCGCCTCTCCCCCAGCGTGGTGGACTCAGCCTCAGCACAAGCCCAAGCACAACAAGCCCAAGCCCAAGCCCATCAGCAAGTCCAATTTCAAGCCCATCATCACCACCACCTGCCCCACTCTCTCACCACTTTCCTCCTCCTCCACCTCCTCCGTACTCCTCCTTCCACCACCATCACATGAATAATAATTCTCCATCTACCGTTGTTGTTCCCAACATGCTCTTATCCCTTGGAAATGCCGCATGCTCTTCCGGTTCTGGATTCAACCACCACCACCACCACCAGAAAGACTTGAACAGCTCGAAGAAGAGGCATAGGACCAAGTTCAGCAAGGAACAGAAGGAGAAGATGCTGAGATTCTCAGAGAAGCTTGGTTGGAGAATGCAGAGAGATGAAGATGGTTTGATTCAAGAGTTTTGCAACCAAATTGGGGTTTCTAGAGGGGTCTTCAAGGTTTGGATGCACAACAACAAGAACACCTTCTTCAGAAACAGGAACAACAACAACAACAACGATAATGCTTCTGCTGCAGAAAAGAATGGGAGTCTTAATGGTGTTGATAATGGTAACCATATCGATAACGATAATGATGATGATCATAATAATAATGATAATGGAAATGGTAATCAACACAGCAACAACACTAGTAGCAGCAACGATGACATTCACAGAGATTATTAA 1089 0.5096 MDLTPIDASTTHTQTQTIEHTNSQQTQTPPQPTTNGSLKRHHPLPTTAIAAAPPLSMVISYKECLKNHAATIGGHALDGCGEFMPSSSSNPSEPRSLTCAACGCHRNFHRRDPESLLPHHHHHHPNFLSFYHHSSSPPLPQRGGLSLSTSPSTTSPSPSPSASPISSPSSPPPAPLSHHFPPPPPPPYSSFHHHHMNNNSPSTVVVPNMLLSLGNAACSSGSGFNHHHHHQKDLNSSKKRHRTKFSKEQKEKMLRFSEKLGWRMQRDEDGLIQEFCNQIGVSRGVFKVWMHNNKNTFFRNRNNNNNNDNASAAEKNGSLNGVDNGNHIDNDNDDDHNNNDNGNGNQHSNNTSSSNDDIHRDY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1741 362 MobiDBLite consensus disorder prediction 231 246 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 220 250 - -
Ahy5g1741 362 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 238 295 IPR006455 -
Ahy5g1741 362 Gene3D - 223 297 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 132 200 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 298 326 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 132 156 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 1 41 - -
Ahy5g1741 362 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 61 112 IPR006456 -
Ahy5g1741 362 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 38 307 - -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 157 190 - -
Ahy5g1741 362 Pfam ZF-HD protein dimerisation region 59 113 IPR006456 -
Ahy5g1741 362 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 307 - -
Ahy5g1741 362 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 61 112 IPR006456 -
Ahy5g1741 362 MobiDBLite consensus disorder prediction 298 362 - -
Ahy5g1741 362 SUPERFAMILY Homeodomain-like 225 297 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1741 Ahy-Chr5 58346060 58347590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1741 44 313 ZF-HD Transcription Factor Family AT2G02540 35.816 2.88e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy5g1741 ZF-HD_dimer 1.50E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1741 - - ahf:112803563 523.857