Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy5g1740 | ATGTCGTTCAAGCACCGGGCTTATGTTCAACAATTAGAAATAAGCCGTTTGAAGCTCATGCAATTGGAGGAGGAGATTGTTAAAGTGAAAAAAACAGTTGAATATGAAAATTGGATTGAAGAGCAACACAAACTGAATGAAGAACTCAGAAATGCATTCCAAACAAAAGCACATGATGAACAACTCAATCAACTTATCCAGACTCTGTTGAACCATTACTCAAATCTTTTCAAGATGAAATCAGATGCTGCAAAGGTTGATATATTCTACCTAATCAGTGGTATCCGGAGATCATCCGCGGAGCGCCTTTTCCTTTGGATCGAAGGATCTCGCCCTTTGCAGCTTCTATGTGTAATCTGA | 360 | 0.3917 | MSFKHRAYVQQLEISRLKLMQLEEEIVKVKKTVEYENWIEEQHKLNEELRNAFQTKAHDEQLNQLIQTLLNHYSNLFKMKSDAAKVDIFYLISGIRRSSAERLFLWIEGSRPLQLLCVI* | 120 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy5g1740 | 119 | ProSiteProfiles | DOG1 domain profile. | 28 | 119 | IPR025422 | GO:0006351|GO:0043565 | |
| Ahy5g1740 | 119 | PANTHER | FACTOR TGA7, PUTATIVE-RELATED | 5 | 29 | - | - | |
| Ahy5g1740 | 119 | Coils | Coil | 35 | 55 | - | - | |
| Ahy5g1740 | 119 | PANTHER | FACTOR TGA7, PUTATIVE-RELATED | 32 | 119 | - | - | |
| Ahy5g1740 | 119 | Coils | Coil | 5 | 32 | - | - | |
| Ahy5g1740 | 119 | Pfam | Seed dormancy control | 47 | 118 | IPR025422 | GO:0006351|GO:0043565 | |
| Ahy5g1740 | 119 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 32 | 119 | - | - | |
| Ahy5g1740 | 119 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 5 | 29 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy5g1740 | Ahy-Chr5 | 58325679 | 58328366 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy5g1740 | 3 | 119 | Calmodulin-binding Proteins | AT1G77920 | 49.254 | 7.31e-37 | 126 |