Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1722 ATGGCCTTTTCACCCACTGAAGAAGGATCAATTACTACATTCACCAATCCAACACTAGGCGATGAACAATTTAATGTGGATGAATTAGACATTCAAGAACAAGTAGGGTACAATTTCGACGAAATTACCGATGTCGTTGTGACTAGAAAGGATGAGCTGGACGATGGAGGCCAGTTGCCGGATCATAGTGGCGTAGGTGAAGAGGAAATTCCAGTCGTAGGTATGAGTTTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTATACAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACGAATTTTGACAAGACGCGGAAGGAATCAAAGGTACCGGTTAATCAATCTATTTACTGCACGCGTGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAATAGAATTACAGCCACGAGATGCAAAGCAACGAATCCAAGGATGTATGTCGTGCTGGACAATGAGAATGAATGTTGGGTTGTGTCTAGATTAGAACTGAGGCATTCTCACCCTTGTTCGGCTGAGAAAGCTGTCCATTATCATGAGTACCGGGAGCTGACCATGCATGCTAAGTGCGTCATTACGGATAACGACGAGGCTGGAATAAGACCCAACAAGATGTATCTAGCCCTAGCAAACGAGAACAGTGATCACAATTTCGTCAACCAGTCCGCAAACCTGGGTTTTTCAGAAAAGGATGTCAGAAATTACATCACACGCAATCTCCGATGTTCCGATGACAACGAGGACTTCCAGGGGATGATGAATTATTTTGTTCGAATGAAGGAGATCAATCCCAACTTCTTCTATGCAATAGATGTTGACGATGCTAATAAGTTTAGGAGCGCACTTTGGGTAGATGCAAGGTGCAGGGCTTCGTATGAATATTACGGAGATGTGGTGTCGTTTGACACCACATACAGAAGAAACAGGCATGGTCTGCCGTTTGCATCCTTTGTAGGTGTAAACCACCATGAGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGCGAGGAGATCCCTAATTTTGAGTGGGTTTTCACGCAGTGGGTGAGATGCGTCGGATCTGCACCAAGGGATATTATCACTGACCAGTGCAAGGCGATGACTGGGGCTATTAGGAATGTCCTACCCGACACTGTCCACCGATGGTGCATCTGGCACATAATGAAAAAATCACAATTCAAGCTTGGTGGATACGCTAGGTACGGAGAACTGCATGCAGTGATGAATCACATTGTGTGA 1263 0.4489 MAFSPTEEGSITTFTNPTLGDEQFNVDELDIQEQVGYNFDEITDVVVTRKDELDDGGQLPDHSGVGEEEIPVVGMSFGSLPLAQKFYANYTKKVGFVTKIRNTNFDKTRKESKVPVNQSIYCTREGYRESRVNAATRANRITATRCKATNPRMYVVLDNENECWVVSRLELRHSHPCSAEKAVHYHEYRELTMHAKCVITDNDEAGIRPNKMYLALANENSDHNFVNQSANLGFSEKDVRNYITRNLRCSDDNEDFQGMMNYFVRMKEINPNFFYAIDVDDANKFRSALWVDARCRASYEYYGDVVSFDTTYRRNRHGLPFASFVGVNHHEKSTLLGCALLGSEEIPNFEWVFTQWVRCVGSAPRDIITDQCKAMTGAIRNVLPDTVHRWCIWHIMKKSQFKLGGYARYGELHAVMNHIV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1722 420 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 69 404 - -
Ahy5g1722 420 Pfam MULE transposase domain 305 398 IPR018289 -
Ahy5g1722 420 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 404 IPR031052 GO:0006355
Ahy5g1722 420 Pfam FAR1 DNA-binding domain 85 177 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1722 Ahy-Chr5 55258336 55262415 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1722 MULE 4.10E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1722 - - ahf:112730161 800.045