Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1704 ATGAGTAGTGGGAAAGAGGTAAATAACAGTGAAAAGTCCAAAGTGTGTGCAAGAGGGCATTGGAGGCCTTCAGAAGATTCCAAGCTGAAGGAGCTTGTGGCTCTTCATGGCCCTCAGAACTGGAACCTCATTGCTCAGAATCTAGAAGGAAGATCAGGGAAGAGTTGTAGGTTGAGATGGTTCAACCAACTAGATCCAAGAATAAAGAAGAATCCATTCAGTGAAGAGGAGGAAGAGAGGCTAATGGAAGCACATAGAGTGTACGGTAAAAAATGGGCCATGATTGCAAGGCTATTTCCTGGCAGAACAGATAATGCTATCAAGAACCACTGGCATGTTATCATGGCCAGAAACTACAGGGAGCAAAAATCCTTTACTTCTAGGACCAATAGGAAAATCAGAAGATATAATACTAATAACCGTCAGAGCCTTCTCTTCAGTAGAAATAACATCACCACCAGTACTACTAGTGGTTATTATGGTGGTCAGTTTATTAATGGTTCAGCAACTATTACTCACATGGCTACTGCTTGTTGGAGACAACAACAAGATAATAATGAAGAGGACCCTAATGGCTTCTATAATCAACAACAGTTTCCTTTTGATTATTGTTTCTTCTCTGCTGGTGCGACTAGCAATTATGATAGATATTATTGGGATAATACTAATGACGATGGTGATGAATATCATAATCTTCGTCATATTAATCCCCAACAATATCTCTATCAAATTCAAATGCCAAAAGACCACAACTTTTACAGTTACTCATCAGGTTCCTCTTCAACAATTACAACAACACCCCATGTTTGTTTGGCCATGGAACTATCATCGTCATCAACAACATCATCCTTTGCTCAAGACAGGAACAAGGTCCCTATTAGGGACCCCCATGATGCATCTTCTAATTATACACCACCATTTATTGACTTCCTCGGAGTAGGAGCCACATGA 951 0.4017 MSSGKEVNNSEKSKVCARGHWRPSEDSKLKELVALHGPQNWNLIAQNLEGRSGKSCRLRWFNQLDPRIKKNPFSEEEEERLMEAHRVYGKKWAMIARLFPGRTDNAIKNHWHVIMARNYREQKSFTSRTNRKIRRYNTNNRQSLLFSRNNITTSTTSGYYGGQFINGSATITHMATACWRQQQDNNEEDPNGFYNQQQFPFDYCFFSAGATSNYDRYYWDNTNDDGDEYHNLRHINPQQYLYQIQMPKDHNFYSYSSGSSSTITTTPHVCLAMELSSSSTTSSFAQDRNKVPIRDPHDASSNYTPPFIDFLGVGAT* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1704 316 CDD SANT 21 62 IPR001005 -
Ahy5g1704 316 PANTHER OS08G0435700 PROTEIN 8 316 - -
Ahy5g1704 316 CDD SANT 81 112 IPR001005 -
Ahy5g1704 316 Gene3D - 71 145 - -
Ahy5g1704 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 64 IPR017930 -
Ahy5g1704 316 SMART sant 69 117 IPR001005 -
Ahy5g1704 316 SMART sant 17 66 IPR001005 -
Ahy5g1704 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Ahy5g1704 316 SUPERFAMILY Homeodomain-like 18 111 IPR009057 -
Ahy5g1704 316 Gene3D - 18 69 - -
Ahy5g1704 316 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Ahy5g1704 316 MobiDBLite consensus disorder prediction 1 22 - -
Ahy5g1704 316 ProSiteProfiles Myb-like domain profile. 18 64 IPR001005 -
Ahy5g1704 316 PANTHER MYB PROTEIN-RELATED 8 316 - -
Ahy5g1704 316 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Ahy5g1704 316 Pfam Myb-like DNA-binding domain 18 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1704 Ahy-Chr5 51158754 51160543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1704 5 124 MYB Transcription Factor Family AT1G69560 75.000 3.66e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy5g1704 Myb_DNA-binding 9.20E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1704 K09422 - gmx:100789305 247.284