Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1666 ATGGTTGGTGGTGGTGGAAATGGAGAGAGACCGCCGTGGAAGGCGGCAAATAGTGGCGGCGGCGTGGAGGAGCAGCCACCACAGAGACCGAGCATCACTCTGCCGACACGTGGCGGTGGTGGTGGTTCCATGGAGAGTCTTTTCGGCGGCGGTTTCAGCCCTGGTCCGATGACACTAATCTCAAGCTTCTTCGGCGGCGACGATGGCAATAAGTCGTTCTCTCAGCTTCTCGCCGGAGCCATGGCATCTCCAACGGCGGCGGCGGGGCCCAGTGGCCTGATTGATTCTCCTTCTGCCTTGTTTTCATCTTCTCAGGTTCCCCTAGGACATCAGCAGGCATTATTAGCACAGGTCACTAGTCAAGGAACACAACTACACTCAAGTATGCAAGTCCAACCTCAAGATTCACTGCAAACAATGTCTGCTACTACGTCATTCGCACAAGTTCATGCTGCAAACACTTCCAACAACAATACTAATCCACACATGGTAGAGCCTTCTTCTTCCTCATTGAATGTCGATAAGCCTGCTGATGATGGCTACAATTGGAGAAAATATGGCCAGAAACAGGTGAAGGGTAGTGAGTTTCCTAGGAGTTACTACAAGTGCACTCATGCAAGTTGTCCTGTGAAGAAGAAAGTTGAGAGGTCATTAAATGGACACATTACTGCAATTATATATAAAGGAGAGCACAATCACCAGCGTCCGAATAGGCGCTCGAAAGATGCTGCCATGGCATCGAGTGAAGGCTCAAACATGCAGGGGAATGCTGATTATCATCATGATCATGGTACAAGTGCTAATCACCCTAGAATGGATGCAGAATCTAGTCAGGCTACAGGTGAACACCTTTCTGGAACAAGTGATAGTGAGGAAGTAGGTGATCATGAAAATGAGGTGGATGACAAAATTGTTGAGCCTGATCCCAAGAGGAGAAATACAGAGGTGACACACTCAGATCCAGATTCTTCACATAGGACAGTCACAGAGCCAAGAATCATTGTGCAAACAACAAGCGAAGTTGATCTCTTAGACGATGGCTATAGATGGCGAAAGTATGGACAAAAAGTTGTCAAAGGCAATCCATATCCTAGGAGCTATTACAAATGTACAACACCAGGTTGTAATGTTAGGAAGCATGTTGAGAGAGCTTCAACAGACCCTAAAGCTGTCATAACAACATATGAAGGAAAGCATAACCATGATGTACCAGCAGCTAAGATTAATAGCCACACTATTGCCAACAATAGTTCATCACAGTTTAAATCACAAAATAGTAATATACCTCAGATGCATGGTTTTGGAAGCAAAGGTATTGGGGTCAATGAGCAACAGCAACAGCCTGTGGCGCGTCTAAGGCTGAAGGAAGAGCAGATAACATAG 1383 0.4649 MVGGGGNGERPPWKAANSGGGVEEQPPQRPSITLPTRGGGGGSMESLFGGGFSPGPMTLISSFFGGDDGNKSFSQLLAGAMASPTAAAGPSGLIDSPSALFSSSQVPLGHQQALLAQVTSQGTQLHSSMQVQPQDSLQTMSATTSFAQVHAANTSNNNTNPHMVEPSSSSLNVDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHASCPVKKKVERSLNGHITAIIYKGEHNHQRPNRRSKDAAMASSEGSNMQGNADYHHDHGTSANHPRMDAESSQATGEHLSGTSDSEEVGDHENEVDDKIVEPDPKRRNTEVTHSDPDSSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKINSHTIANNSSSQFKSQNSNIPQMHGFGSKGIGVNEQQQQPVARLRLKEEQIT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1666 460 ProSiteProfiles WRKY domain profile. 178 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 SUPERFAMILY WRKY DNA-binding domain 336 404 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 459 IPR044810 GO:0003700
Ahy5g1666 460 ProSiteProfiles WRKY domain profile. 339 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 MobiDBLite consensus disorder prediction 244 261 - -
Ahy5g1666 460 Gene3D WRKY domain 329 405 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 Gene3D WRKY domain 165 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 Pfam WRKY DNA -binding domain 345 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 Pfam WRKY DNA -binding domain 178 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 SMART WRKY_cls 177 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 SMART WRKY_cls 344 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 MobiDBLite consensus disorder prediction 1 51 - -
Ahy5g1666 460 MobiDBLite consensus disorder prediction 288 327 - -
Ahy5g1666 460 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 89 459 - -
Ahy5g1666 460 MobiDBLite consensus disorder prediction 227 329 - -
Ahy5g1666 460 MobiDBLite consensus disorder prediction 436 460 - -
Ahy5g1666 460 SUPERFAMILY WRKY DNA-binding domain 175 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1666 460 MobiDBLite consensus disorder prediction 153 174 - -
Ahy5g1666 460 MobiDBLite consensus disorder prediction 270 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1666 Ahy-Chr5 46316034 46324501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1666 29 460 WRKY Transcription Factor Family AT2G03340 48.762 3.70e-136 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy5g1666 WRKY 1.10E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1666 - - aip:107643570 900.197