Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1654 ATGGAATTGGAAGCTGATCATAATCACCATCACCATCACCATCAAAACGGAATCAGAACCAGACCTAATTTCCCTCTTCAGCTGTTGGAGAAGACTAAAGACGTCGAAGACTCAGTCGCGGAACAGCCATGCTCCACCGTCGCCGAACAACCCGGTGACGGAGCAGGCACCGCCGTCACTTTACAGGACCAGCAACAGAATACCACCAAGAAGCCGCCGCCAAAGCGGACCTCCACCAAGGACCGGCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGGATGCCGGCGGCCTGCGCCGCTCGCGTGTTCCAGTTGACGCGGGAGTTAGGGCACAAATCCGATGGCGAGACCATCGAGTGGCTACTACAGCAAGCGGAGCCGGCGGTGATCGCCGCAACCGGCACCGGCACCATCCCCGCCAACTTCACCTCGCTCAACATTTCGCTTCGGAGTTCCGGGTCTACCGTTTCGGCGCCGTCACACTACTTCAGAGGAAGCTACTTCAATCCTAGCACGTTCTCTTCGGCCGCCGTTGCGGCAGCTGTCGGCGGCGGAAGGATCCGCAGCGGAGCTGGCGATAATTGGGAGCGTAGCATGGGCATGAATATGAACATGAACATGAATATGAACATAGCAACGATGGAAGATTCTAGAAGGTTGTTGTTTCCAGGTTCATCGGAGAATTGTTCTAATTCCATGGGATTGAACTTCAACCCTAGCACCGTGAATGCCGTTCTCCAAGCAAAGCAAGAACTCCGTGAAGACGGCGCCGCCGCTGCTGGTGGTGGTGGAAATCTTGATTTGGATGGCGGTGATTGCGACGGAAACATGGCTAGAAAGAGAAGAATGGAACAAGAGGTTTCCGTTTCACACCAGATAGCAGGAAACTACTTGTTACAATCAAGTACCGCGGGTTCGGTTCCGGCGAGCCACGCTTCGAATCCCGCAACGTTTTGGATGGTGACTGGGCACCAAGGCATGAATGGTGGTGGCGGCGGCGGCGGCGGCGGTAGTAATAATGATCAAATTTGGGCAATTCCGTCACTGGGGAGTGGTGGTGGAGTTTATAGAGGGGGTATGCCTGGCGGTGTTGGTGGGATTCATTTCATGAATTTTGGTTCACCAATGTCTCTTATGCCTGGTGGACAACTAGGTTCCGCCATGGTCGGTGGCGGCAGCGGCGGTGGTGGAGCAATGCTGAGTGAAAGCAATAATTTAGGTATGCTTGCAGCACTTAATGCCTATAGGCAGATTCCGGCCAATGGCAGTGGCGTTTCGGAGTCTCCGGCAAGCACCGGAAACCACCAACATCACGGTGGAGATGATGGGCATGAAACAACAAGTCAACAGCAACATTCTTGA 1365 0.548 MELEADHNHHHHHHQNGIRTRPNFPLQLLEKTKDVEDSVAEQPCSTVAEQPGDGAGTAVTLQDQQQNTTKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRIRSGAGDNWERSMGMNMNMNMNMNIATMEDSRRLLFPGSSENCSNSMGLNFNPSTVNAVLQAKQELREDGAAAAGGGGNLDLDGGDCDGNMARKRRMEQEVSVSHQIAGNYLLQSSTAGSVPASHASNPATFWMVTGHQGMNGGGGGGGGGSNNDQIWAIPSLGSGGGVYRGGMPGGVGGIHFMNFGSPMSLMPGGQLGSAMVGGGSGGGGAMLSESNNLGMLAALNAYRQIPANGSGVSESPASTGNHQHHGGDDGHETTSQQQHS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1654 454 MobiDBLite consensus disorder prediction 438 454 - -
Ahy5g1654 454 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Ahy5g1654 454 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 451 IPR005333 GO:0003700
Ahy5g1654 454 MobiDBLite consensus disorder prediction 1 90 - -
Ahy5g1654 454 MobiDBLite consensus disorder prediction 57 73 - -
Ahy5g1654 454 MobiDBLite consensus disorder prediction 421 436 - -
Ahy5g1654 454 Pfam TCP family transcription factor 77 181 IPR017887 -
Ahy5g1654 454 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 15 451 - -
Ahy5g1654 454 MobiDBLite consensus disorder prediction 421 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1654 Ahy-Chr5 45333520 45335859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1654 22 384 TCP Transcription Factor Family AT3G47620 39.808 1.63e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy5g1654 TCP 2.00E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1654 - - adu:107489244 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1654 5 45333520 45335859 Ahy11g1889 11 123697086 123699113 PCT
Ahy5g1654 5 45333520 45335859 Ahy1g2973 1 111395901 111397912 PCT