Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1628 ATGGCTTGTCTCTCGCTGCAACTGCTGCTTTTGTGTTTCACCACTCTCACAATTCATGCGACAAAGGTGACATGTGCAGAACCCTACCATCACCGTAGCACCCTTAGAACATTGTCTTCTTCTTCTTCTACCAAATCCTCCTCCAATCATCGTCGGAACCACACTTGGGTGGGACCAATAGGTCAGCGCGTAATCACCGTTGACGTCAACGGCGGTGGACAGTTCCGGTCGGTGCAAGCTGCGGTGAATGCCGTCCCAGACAACAATAGAATGAACATACTGATCCAAATCAGCCCGGGATACTACATAGAGAAGGTTGTTGTGCCCGTGACGAAGCCGTACATAACGTTTGAGGGAGCGGGAAAAGAAGTGACGGTGATAGAATGGCATGATAGGGCCAGCGACCCTGGTCCCAACGGACAGCAACTGCGTACTTACAGAACTGCTTCTGTCACTGTTTTCGCCAACTATTTCTCTGCTCGCAATATCAGCTTCAAGAACACAGCGCCAGCACCAATGCCGGGGATGCATGGCTGGCAAGCGGCGGCGTTTCGAATATCCGGTGACAAAGCATACTTCTCAGGCTGTGGATTCCACGGAGCACAAGACACTCTTTGCGACGACGCTGGCAGGCATTACTTCAAGGACTGCTATATCGAGGGTTCAATTGATTTCATATTTGGGAATGGCAGATCCATGTACAAGGATTGCCAGCTACACTCAATAGCAACGAGATTTGGCTCCATAGCAGCCCATGGTAGGAAACAGGCAGAGGAGAAGACGGGCTTTGCATTCGTGAGATGCAGGGTGACGGGCACAGGCCCGCTCTATGTGGGCAGAGCCATGGGCCAGTACTCCAGAATTGTCTACTCTTACACTTACTTCGATGACATTGTTGCTCATGGCGGCTGGGATGATTGGGACCATGCCAACAATAAGAACAAGACTGTGTTCTTTGGAGTGTACAAGTGTTGGGGGCCAGGAGCAGAGGCAGTACGTGGGGTATCATGGGCCAAAGAGTTAGATTTCGAATCTGCCCACCCATTTCTCGTCAAGAGCTTTGTCAATGGCAGACACTGGATTGCGCCTTCTGATGCCTAG 1101 0.5114 MACLSLQLLLLCFTTLTIHATKVTCAEPYHHRSTLRTLSSSSSTKSSSNHRRNHTWVGPIGQRVITVDVNGGGQFRSVQAAVNAVPDNNRMNILIQISPGYYIEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMHGWQAAAFRISGDKAYFSGCGFHGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHGRKQAEEKTGFAFVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGAEAVRGVSWAKELDFESAHPFLVKSFVNGRHWIAPSDA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1628 366 PANTHER PECTINESTERASE 68-RELATED 31 365 - -
Ahy5g1628 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 365 - -
Ahy5g1628 366 SUPERFAMILY Pectin lyase-like 62 363 IPR011050 -
Ahy5g1628 366 ProSitePatterns Pectinesterase signature 2. 219 228 IPR033131 -
Ahy5g1628 366 Pfam Pectinesterase 65 357 IPR000070 GO:0030599|GO:0042545
Ahy5g1628 366 Gene3D - 61 365 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1628 Ahy-Chr5 42551770 42557346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1628 32 366 Carbohydrate Esterase AT5G47500 76.418 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1628 - - cam:101501763 625.55