Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1617 ATGGTGAAGATTGCTGTTGGTTCTTTTGATGACTCTTTTAGCGTTACCTCTCTCAAGGCTTATTTGGCAGAGTTCATTGCCACTCTTATCTTCGTCTTTGCTGGTGTTGGTTCAGCCATAGCCTACAATGAGCTTACATCAGATGCAGCTTTGGACGCGCCAGGGCTGGTGGCGGTGGCGGTGGCGCACGCATTTGCTCTGTTTGTAGGAGTGTCCATCGCTGCCAACATCTCAGGTGGCCACTTGAACCCAGCTGTCACTTTTGGATTGGCCATTGGAGGCAACATTACCCTCCTCACTGGTCTCTTCTACTGGATTGCCCAATTGCTTGGCTCCATTGTCGCATCTCTCCTCCTAAGTTATGTCACAGCTAAGAGCATTCCAACCCATGGAGTGGCTGGGATAAACGTTTTTGCTGGAGTGGTGTTCGAGATCGTTGTTACTTTTGGATTGGTGTACACTGTATACGCTACCGCAGCTGACCCCAAAAAGGGCTCACTTGGCACCATTGCACCCATTGCTATTGGGTTCATTGTGGGTGCCAACATCCTAGCTGCTGGCCCATTCAGTGGTGGATCAATGAACCCGGCCCGTTCATTCGGCCCAGCAGTTGTTAGTGGTAACTTCGCTGACAACTGGATCTACTGGGTTGGCCCGTTGATTGGTGGGGGCTTGGCTGGGCTTATTTATGGTGATGTTTTCATTGGTTCCTATACCCCTGCCCCAGCCACTGAAAACTACCCTTGA 747 0.5074 MVKIAVGSFDDSFSVTSLKAYLAEFIATLIFVFAGVGSAIAYNELTSDAALDAPGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTFGLAIGGNITLLTGLFYWIAQLLGSIVASLLLSYVTAKSIPTHGVAGINVFAGVVFEIVVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGNFADNWIYWVGPLIGGGLAGLIYGDVFIGSYTPAPATENYP* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1617 248 Pfam Major intrinsic protein 14 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 CDD MIP 19 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 SUPERFAMILY Aquaporin-like 14 238 IPR023271 -
Ahy5g1617 248 Gene3D Glycerol uptake facilitator protein. 2 239 IPR023271 -
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 176 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 PRINTS Major intrinsic protein family signature 213 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 TIGRFAM MIP: MIP family channel proteins 23 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy5g1617 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Ahy5g1617 248 PANTHER AQUAPORIN TIP2-2-RELATED 1 248 - -
Ahy5g1617 248 PANTHER AQUAPORIN-8 1 248 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1617 Ahy-Chr5 42390954 42392670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1617 1 245 Major Intrinsic Protein MIP AT5G47450 81.377 4.21e-135 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1617 K09873 - fve:101300912 404.831