Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1597 ATGAAGAAGCTATGCACTTCATTGTTGTTGTTGTTTCTGGGTTTGGTTTCCATGTTCGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCGTTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGAGCGACAATGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGACTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTTGTGAACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTTGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGCTTGCATTATCTTCCAAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGACGCAAAGCAGCGGCCTTCTATTCAATGTGCCGGTGCATCACCTGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGATTGGTTCTCTCTTCCTGATTGCTCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGATCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCAGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAATATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCGCGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTGGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTGGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGTCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTCGCACTCTTATCATAA 1989 0.4299 MKKLCTSLLLLFLGLVSMFALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILSDNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVNMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGMYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPSLYFQGNCLQIQNKDAKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMIGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCVMLESRIDTSTSVELKSSSLAWAELALLS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1597 662 Gene3D Transferase(Phosphotransferase) domain 1 445 653 - -
Ahy5g1597 662 PANTHER PROTEIN MALE DISCOVERER 2 9 660 - -
Ahy5g1597 662 ProSiteProfiles Protein kinase domain profile. 363 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1597 662 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 660 - -
Ahy5g1597 662 Gene3D Phosphorylase Kinase; domain 1 336 444 - -
Ahy5g1597 662 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
Ahy5g1597 662 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Ahy5g1597 662 SUPERFAMILY L domain-like 28 241 - -
Ahy5g1597 662 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Ahy5g1597 662 SUPERFAMILY Protein kinase-like (PK-like) 339 637 IPR011009 -
Ahy5g1597 662 Pfam Protein tyrosine and serine/threonine kinase 367 634 IPR001245 GO:0004672|GO:0006468
Ahy5g1597 662 Gene3D Ribonuclease Inhibitor 143 261 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1597 Ahy-Chr5 42027794 42032140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1597 37 641 Receptor kinase-like Gene Family AT5G45780 29.402 4.81e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy5g1597 PK_Tyr_Ser-Thr 5.60E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1597 - - ahf:112749652 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1597 5 42027794 42032140 Ahy13g2869 13 114848650 114853687 PCT
Ahy5g1597 5 42027794 42032140 Ahy3g2533 3 112342949 112347773 PCT