Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1581 ATGTATTCTGATATGCATGGTTTTGATATTTTGTCACACATGTTCAATGAAGAAATCCCAGACCTTATTCTTTTCTCTGATGATCCTCTTCCTCTCTTCACAGCTCAAGAAAACATAATTGATTCTCTTGATCCTTTATCCCTTTCATGCATCAATTTCTCAGAGTCCCAAATGGTGGCGGATCATTGTTCCAACAATCATCAGCACCATCTAAGTCTTCCTCACAGTTACCTGCAGAGGAGCTCCAGTTGCAAATCGTTTGATAGAAAACCAGTTTTTCCACCATGTGAAGCTCACAACGACACTTTGATGGATTCCCCAACTTCTGAGTGGGAAAACGATTTCTTCAAAGGACAAATAAGGAGGGTCTTCAGTGCAGGAGACTTGCAGAACATGCATGCAACTCAAACACTTCAGACGGATGAACCGTACTTGAAGGTGGGGCGTTACAGTCCCCAAGAAAGGAAAGAGAAAATCTCAAAGTACAGGGCCAAGAGAAGCCAGAGGAAGTTCAACAAGACTATCAAGCAGTATGCATGCCGAAAGACACTAGCCGACAATCGAGTCCGCATACGTGGCAGATTCGCACGCAACGACGATACCAGCGTGATTCCAAAAGCCCCATGTTCAACTTCAAATACACAGCAAGACCAAGATGAATTCTGGATTGAAATGATTGAAGCGTTGAATGAGTAG 696 0.4325 MYSDMHGFDILSHMFNEEIPDLILFSDDPLPLFTAQENIIDSLDPLSLSCINFSESQMVADHCSNNHQHHLSLPHSYLQRSSSCKSFDRKPVFPPCEAHNDTLMDSPTSEWENDFFKGQIRRVFSAGDLQNMHATQTLQTDEPYLKVGRYSPQERKEKISKYRAKRSQRKFNKTIKQYACRKTLADNRVRIRGRFARNDDTSVIPKAPCSTSNTQQDQDEFWIEMIEALNE* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1581 231 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 52 229 IPR045281 GO:0009909
Ahy5g1581 231 ProSiteProfiles CCT domain profile. 155 198 IPR010402 GO:0005515
Ahy5g1581 231 Pfam CCT motif 155 198 IPR010402 GO:0005515
Ahy5g1581 231 PANTHER CCT MOTIF FAMILY PROTEIN 52 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1581 Ahy-Chr5 41804401 41806341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1581 125 201 C2C2-CO-like Transcription Factor Family AT5G15850 37.662 4.84e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy5g1581 CCT 8.50E-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1581 - - adu:107488152 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1581 5 41804401 41806341 Ahy13g2811 13 111038079 111040299 PCT
Ahy5g1581 5 41804401 41806341 Ahy3g2485 3 108502857 108504817 PCT