Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1577 ATGGCTCGAGCAGTGTGCGAAGAGAAATCGAGGGAGATGGTGTCATCATCAGGTGGTTTCTGTTACTCGGGGACGACGATGGAAGGGTTGGTGGGGGACCCTGCAGACATGTTCAACAACCTCACCAGTGGCATGGACATGGTAGGGTTTTCGAAGAATGTTGATAGCAACAACCCTCACATGTGGAAGGCTTTGTTTGGGAAACAAGGGCCTTCCAGTAGGAGCATCAACAACGATTCTTCTTCAGCCTCCTTCTACCAACAGCAACAGGTTGATGATGATTCATCGTGGCAGGAGAACAGGTTGGTGGTTGACGATTCATCTCTGAGGTGTGTGTTCCCATGTGAAGGAAACGAGAGGCCAAGTCAAGGTCTCTCGCTCTCTCTAAGTTCAACCAATCCCTCATCCATTGGCTTGCAATCTTTTGAGCTCAGACAAACCACTCACCCTCAGTCTCAGCCTTATTATGCATATCAAAATTTTGCTAATAATAATAATAAAGCTGCAGCTTCCTCCTCATCTACTAGTGCTTATCAAGGACACTTGATGCTCAAGAACTCCAAGTACTTAGTTCCAGCACAGGATCTTCTCAACGAGTTTTGTAGCCTGGCCATAAAGCACAAGTCCAACAACAACAACCACCAGCACTGGGAAGATCACGATTCCTCAAAGAAGCCTTCTCCTACCTCTATTGAATTCCTGGAGCTGCAAAAGCGAAAGACCAAACTGCTTTCCATGCTCGAAGAGGTTGACAGGAGATACAAGAACTACCGGATTCAGATGAAGGCGGTGGTGTCTTCCTTTGAGGCGGTGGCTGGGAACGGTGCTGCCACGGTTTACACGGCTTTGGCACAGAAAGCCATGTCTAAATATTTCAGGAACTTGAAGGATGCGATAATGGGGCAGATTCAGGCGACAAGAAAGGCCATGGGAGAGAAAGATCCAGTTGCACCAGGCACCACCAAGGGCGAAACCCCGAGGCTGAAGATCATTGACCAAGCTTTGAGGCAGCAAAGGGCATTCCAGCAAATGAGCATGATGGAAACTCATCCATGGAGACCTCAGCGTGGCCTTCCCGAGCGCTCCGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTCCATCCTTACCCAAGCGACGTTGATAAACATATTCTAGCCCGCCAAACTGGCCTATCAAGAAGCCAGGTTTCAAACTGGTTTATCAACGCAAGGGTTCGTCTGTGGAAGCCAATGGTGGAGGAAATGTACATGGAGGAATTGAAGGAACAAGAAAATATGATGGCTTCTTCGGAGGGTGCTGACGACCCGGACCTCCACCTGCCATCATCACGATCGGAGGATCAGAAGCCAAGCGTAGTGGTTGGAATGGAGTCCGATCAGTGTGCGTCATCATCCATGCTCAACAACATAAAAAACGACCCAAAGAGCAGCCATAATAATCCGGAAGAAGAATGCTTGGGGCGAGTGATGGACACGTTTGGATCGGTGGAGCTTGATTTCTCTTCATACACGCAGCAGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTAACTCTAGGGTTACAACAGCACGGTGGAAGCGGGGTGAGCCTGGCGTTCCCTCCTCCTCCGGTGAGCAGTCATCATAGCTCGCTCTTCTACGCAACAACCAGGGATCAGATAATGGACAGCTGTCCACCCTCATCGTCATCTATAGTTCATCACTACTCTCTTGTTGATGGCGAACCACAAAATCTTCCTTACAGGAATCTCATGGGTGCACAGTTGCTTCATGACCTCGCTGGCTAA 1800 0.4917 MARAVCEEKSREMVSSSGGFCYSGTTMEGLVGDPADMFNNLTSGMDMVGFSKNVDSNNPHMWKALFGKQGPSSRSINNDSSSASFYQQQQVDDDSSWQENRLVVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTTHPQSQPYYAYQNFANNNNKAAASSSSTSAYQGHLMLKNSKYLVPAQDLLNEFCSLAIKHKSNNNNHQHWEDHDSSKKPSPTSIEFLELQKRKTKLLSMLEEVDRRYKNYRIQMKAVVSSFEAVAGNGAATVYTALAQKAMSKYFRNLKDAIMGQIQATRKAMGEKDPVAPGTTKGETPRLKIIDQALRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYMEELKEQENMMASSEGADDPDLHLPSSRSEDQKPSVVVGMESDQCASSSMLNNIKNDPKSSHNNPEEECLGRVMDTFGSVELDFSSYTQQQQQQQQGFNGVSLTLGLQQHGGSGVSLAFPPPPVSSHHSSLFYATTRDQIMDSCPPSSSSIVHHYSLVDGEPQNLPYRNLMGAQLLHDLAG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1577 599 SMART HOX_1 352 416 IPR001356 GO:0003677
Ahy5g1577 599 MobiDBLite consensus disorder prediction 64 97 - -
Ahy5g1577 599 Gene3D - 355 417 - -
Ahy5g1577 599 MobiDBLite consensus disorder prediction 70 97 - -
Ahy5g1577 599 ProSiteProfiles 'Homeobox' domain profile. 349 412 IPR001356 GO:0003677
Ahy5g1577 599 MobiDBLite consensus disorder prediction 425 453 - -
Ahy5g1577 599 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 4 543 - -
Ahy5g1577 599 Pfam Associated with HOX 183 300 IPR006563 -
Ahy5g1577 599 Pfam Homeobox KN domain 369 408 IPR008422 GO:0003677|GO:0006355
Ahy5g1577 599 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 4 543 - -
Ahy5g1577 599 SUPERFAMILY Homeodomain-like 353 419 IPR009057 -
Ahy5g1577 599 CDD homeodomain 352 413 IPR001356 GO:0003677
Ahy5g1577 599 SMART prehox3 178 301 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1577 Ahy-Chr5 41707406 41711271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1577 99 598 Homeobox Transcription Factor Family AT5G41410 45.664 1.02e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Ahy5g1577 POX 2.60E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1577 - - lang:109331282 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1577 5 41707406 41711271 Ahy13g2804 13 110703618 110706904 PCT
Ahy5g1577 5 41707406 41711271 Ahy3g2474 3 108328177 108331519 PCT
Ahy11g1693 11 104253428 104256510 Ahy5g1577 5 41707406 41711271 PCT
Ahy1g1594 1 76083028 76085333 Ahy5g1577 5 41707406 41711271 PCT