Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1573 ATGGTGAGGAAAGAGAAAGAGTCAATTGGAAGTGCCGGTGCCGATGAGGGTAATATTACGGGGGTTCGCACTCACGGAGGTCGCTACGTCAAGTACAATCTGTACGGAAAATTCTTCGAACTTCCCGCCAAATATGTACCTCCTATTCGCCCCATTGGTCGAGGCGCTTATGGCCTCGTCTGTGCTGCTGTTAATTCAGAGACTCGGGAAGAAGTTGCCATCAAGAAGATTGCTGATGCCTTTGACAGTCTTACCAATGCCAAGAGGACTTTGAGGGAGATTCTTCTTCTTCGCCACATGGACCACGAAAATATCATTGCCATTAAGGATATCATTCGACCTCCTAAGAAGGACACCTTCAACGATATCTACATTGTCTCTGACTTGATGGACATTGATCTGTACCACGTTCTTCGTTCTGATCAACCTCTTAACCATGACCACTCTCAGTACTTTTTATACCAGCTCTTACGGGGACTGAAATATGTGCATTCCGCTAATGTCTTGCATCGTGATCTTAAGCCTAGTAATATACTTCTCAATGCAAATTGTGACCTTAAAATTGCAGACTTTGGCCTCGCAAGGACCACATCCGAAACCGATTTCATGACTGAATATGTTGTCACCCGATGGTACCGTGCCCCTGAATTACTCCTTAACTGTTCTGATTACACCGCCGCGATTGATGTGTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACTAGAGAACCTTTGTTCCCCGGGAAGGATTATGTTCATCAATTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAAAAGGTATGTTAGACAGCTTCCGCAATGTAGGAAGCAAAAATTCTCTGCCAGATTCCCTAATATGTCTGCGGATGCATTGGACTTGCTAGAAAAAATGCTTATATTTGATCCCAACAAACGCATCACAGTTGATGAGGCACTTAGTCACCCATATCTTTCATCACTTCATGACATAAATGATGAGCCAGTTGGTCCTAGGCCATTCAGCTTTGATTTTGAGCACCCATCATACACCGTAGAGCACATGAAGGATCTTATATGGAGGGAAGCAGTGAAGTTCAATCCAGATCCTCCAGGTCCTTAG 1143 0.4409 MVRKEKESIGSAGADEGNITGVRTHGGRYVKYNLYGKFFELPAKYVPPIRPIGRGAYGLVCAAVNSETREEVAIKKIADAFDSLTNAKRTLREILLLRHMDHENIIAIKDIIRPPKKDTFNDIYIVSDLMDIDLYHVLRSDQPLNHDHSQYFLYQLLRGLKYVHSANVLHRDLKPSNILLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSDYTAAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVRQLPQCRKQKFSARFPNMSADALDLLEKMLIFDPNKRITVDEALSHPYLSSLHDINDEPVGPRPFSFDFEHPSYTVEHMKDLIWREAVKFNPDPPGP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1573 380 ProSitePatterns MAP kinase signature. 81 184 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ahy5g1573 380 ProSitePatterns Protein kinases ATP-binding region signature. 52 76 IPR017441 GO:0005524
Ahy5g1573 380 ProSiteProfiles Protein kinase domain profile. 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1573 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Ahy5g1573 380 Pfam Protein kinase domain 50 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1573 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Ahy5g1573 380 Gene3D Transferase(Phosphotransferase) domain 1 130 359 - -
Ahy5g1573 380 Gene3D Phosphorylase Kinase; domain 1 29 369 - -
Ahy5g1573 380 SUPERFAMILY Protein kinase-like (PK-like) 49 340 IPR011009 -
Ahy5g1573 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 379 - -
Ahy5g1573 380 SMART serkin_6 46 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1573 Ahy-Chr5 41679828 41682197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1573 7 375 MAP Kinase Gene Family AT4G01370 75.610 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy5g1573 Pkinase 1.10E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1573 - - egr:104443843 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1573 5 41679828 41682197 Ahy13g2800 13 109996565 109999146 PCT
Ahy5g1573 5 41679828 41682197 Ahy3g2469 3 107516659 107519514 PCT