Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy5g1566 | ATGGCGAAGGAACTTGAGAACAAAGCCAAAGAGGCATTCTTGGATGACGATTTTGCCCTCGCCGCCGATTGCTACTCAGAAGCCATCAACTTGGATCCCAGCAACCCTCTTCTTTATGCCGACAGAGCCCAAGCCCATATCAAGCTCCAAAACTTCACAGAAGCCGTTTCTGATGCGAACAAAGCCATTCAATTGAGTCCTTCGCTGGCTAAGGCCTACCTTCGTAAGGGAACTGCGTGCATTAAGCTGGAAGAGTATCAAACTGCAAAGGTAGCACTCCAAACCGGTGCCTCTTTTGCTCCCGACGATTCCAGATTCACCAAGCTCATTCAAGATTGTGATCGCTACATTGCAGAAGAATCGAATGATCTTGCTAGCACCTTATTGCCCCGCGTCCCCACAACTCCTGCCGGTAATGGTTCGCATTCGACTGATAGAAGTATAGATTCTACTAAAGAAGCTGAAAGAGACAGTTCGGTACCCCAAATCAATGAAGTTGCAACAACCAGGCCAAAATTCAGGGAAAAAGTGACTGCAACTTTTGATCTGCTATTAATTCTACATGAATACTACCAGAGGCCAGAAGAAGTGGTTGTGACGATATTTGCTAAAGGCATACCAGCAGACGACGTAATTGTTGACTTTGGTGAACAGATTATGAGTGTTACTATTGCTGTTCCCGGACAAGAACCCTATCGTTATCAACAACGATTGTTCGGAAAGATAGTACCCGATAAGTGCAGAGTCCTGGTGTTGTCAACTAAAGTTGAAATCCGCCTTGCAAAAGCTGAAGCTCTTAATTGGACATCTCTGGAATATAGCAAGCATGTGCTTCCTCAGAAAATAAATGCGATGACAAATCAACCTGAAAGGCCAACATACCCATCATCAAAGCCAAGGACAAAAGATTGGGATAAGTTGGAAGCTCTGATGAAAAAAGAGGAGAAAGAAGAGAAGCTAGACGGTGATGCTGCTTTGAACAAATTGTTCCGAGATATTTACCAAAATGCAGATGAGGACATGAGAAGAGCTATGAGCAAGTCATTTTTGGAGTCAAATGGAACAGTGCTGTCAACTGACTGGAAAGAAGTAGGATCAAAGAAGGTGGAGAGCAGTCCCCCTGAAGGCCTGGAGTTGAAGAAATGGGAATATTGA | 1155 | 0.4442 | MAKELENKAKEAFLDDDFALAADCYSEAINLDPSNPLLYADRAQAHIKLQNFTEAVSDANKAIQLSPSLAKAYLRKGTACIKLEEYQTAKVALQTGASFAPDDSRFTKLIQDCDRYIAEESNDLASTLLPRVPTTPAGNGSHSTDRSIDSTKEAERDSSVPQINEVATTRPKFREKVTATFDLLLILHEYYQRPEEVVVTIFAKGIPADDVIVDFGEQIMSVTIAVPGQEPYRYQQRLFGKIVPDKCRVLVLSTKVEIRLAKAEALNWTSLEYSKHVLPQKINAMTNQPERPTYPSSKPRTKDWDKLEALMKKEEKEEKLDGDAALNKLFRDIYQNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVESSPPEGLELKKWEY* | 385 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy5g1566 | 384 | MobiDBLite | consensus disorder prediction | 127 | 145 | - | - | |
Ahy5g1566 | 384 | SMART | tpr_5 | 2 | 35 | IPR019734 | GO:0005515 | |
Ahy5g1566 | 384 | SMART | tpr_5 | 70 | 103 | IPR019734 | GO:0005515 | |
Ahy5g1566 | 384 | SMART | tpr_5 | 36 | 69 | IPR019734 | GO:0005515 | |
Ahy5g1566 | 384 | MobiDBLite | consensus disorder prediction | 127 | 165 | - | - | |
Ahy5g1566 | 384 | Gene3D | Tetratricopeptide repeat domain | 1 | 127 | IPR011990 | GO:0005515 | |
Ahy5g1566 | 384 | ProSiteProfiles | CS domain profile. | 183 | 272 | IPR007052 | - | |
Ahy5g1566 | 384 | ProSiteProfiles | TPR repeat profile. | 36 | 69 | IPR019734 | GO:0005515 | |
Ahy5g1566 | 384 | Pfam | CS domain | 188 | 262 | IPR007052 | - | |
Ahy5g1566 | 384 | Gene3D | - | 186 | 275 | IPR008978 | - | |
Ahy5g1566 | 384 | PANTHER | PROTEIN SGT1 HOMOLOG | 1 | 384 | IPR044563 | GO:0051087 | |
Ahy5g1566 | 384 | CDD | p23_CS_SGT1_like | 189 | 272 | - | - | |
Ahy5g1566 | 384 | MobiDBLite | consensus disorder prediction | 363 | 384 | - | - | |
Ahy5g1566 | 384 | SUPERFAMILY | HSP20-like chaperones | 186 | 278 | IPR008978 | - | |
Ahy5g1566 | 384 | Pfam | Tetratricopeptide repeat | 39 | 68 | IPR019734 | GO:0005515 | |
Ahy5g1566 | 384 | PANTHER | PROTEIN SGT1 HOMOLOG A | 1 | 384 | - | - | |
Ahy5g1566 | 384 | MobiDBLite | consensus disorder prediction | 362 | 384 | - | - | |
Ahy5g1566 | 384 | ProSiteProfiles | SGS domain profile. | 293 | 384 | IPR007699 | - | |
Ahy5g1566 | 384 | Pfam | SGS domain | 302 | 382 | IPR007699 | - | |
Ahy5g1566 | 384 | SUPERFAMILY | TPR-like | 2 | 113 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy5g1566 | Ahy-Chr5 | 41476557 | 41480062 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy5g1566 | 1 | 94 | U-box Gene Family | AT3G07370 | 34.043 | 3.18e-10 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy5g1566 | K12795 | - | gmx:100784022 | 506.138 |