Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1564 ATGAGCTTCATGGACTGGGATTTGCACGCTATAGTGAGAGGATGCACCAATACTCATCAACCCGACAACATCCTAGGTGATCTTAACTATTTCCAGTTAAGTCCTCAACAAGAAATAGATGAACGTTTCTTCAAGTCTCACCAATTCTCAGAAACAGAAACCATCACTACTGCCATCGTTGATGATGAATTGGAAGAGCTTTACAAACCTTTCTATCCTTCTACTACTGTTGATACTACAACTAGTTCCCACCCTACCTCCGCTGAAGTCAACAAAGTACTCCATCTCAAACCTTCAGATCCAACACCATCTAAATGTAAAAGAAGGAAGAAGAATGAAGAGAAGAATAAGCGGGTAGTGAAGCGGATGAGAGAAGAAGAAGGGTACAGTGATGGATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGATCAGAGTATCCGCGGAGCTATTACAGGTGTAGCAGCTGCAAAGGATGCTTGGCTAGGAAACAAGTTGAACGGAGCCATTCCGATCCACAAGTTTTCATAGTTACCTACACAGCTGAACACACCCATCCTCCTCACCCCATCACTACTATTCCAACAAACTCACAAGCACAAGGAACAGTAGTAGGAAGAGGCTGGAAGAGGAGAACCAATCTATAG 651 0.4363 MSFMDWDLHAIVRGCTNTHQPDNILGDLNYFQLSPQQEIDERFFKSHQFSETETITTAIVDDELEELYKPFYPSTTVDTTTSSHPTSAEVNKVLHLKPSDPTPSKCKRRKKNEEKNKRVVKRMREEEGYSDGWAWRKYGQKPIKGSEYPRSYYRCSSCKGCLARKQVERSHSDPQVFIVTYTAEHTHPPHPITTIPTNSQAQGTVVGRGWKRRTNL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1564 216 Gene3D WRKY domain 112 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1564 216 ProSiteProfiles WRKY domain profile. 124 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1564 216 MobiDBLite consensus disorder prediction 95 118 - -
Ahy5g1564 216 SUPERFAMILY WRKY DNA-binding domain 123 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy5g1564 216 Pfam WRKY DNA -binding domain 131 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1564 216 SMART WRKY_cls 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy5g1564 216 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 5 191 - -
Ahy5g1564 216 MobiDBLite consensus disorder prediction 191 205 - -
Ahy5g1564 216 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 191 IPR044810 GO:0003700
Ahy5g1564 216 MobiDBLite consensus disorder prediction 188 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1564 Ahy-Chr5 41465618 41466735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1564 5 188 WRKY Transcription Factor Family AT4G01250 41.414 1.12e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy5g1564 WRKY 2.60E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1564 K13426 - cit:102612567 162.155