Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1489 ATGGACATGCCTTCTTCAAGTTCCAACCATCACAACCCTACCGGCCCTGCTACTTCTCCCTACAGAGGCGTCCGCAAGAGGAAATGGGGCAAATGGGTCTCCGAAATCCGTGAGCCGGGGACCAAGACTCGGATATGGCTCGGCAGCTTCGAGACACCTGAGATGGCGGCCGCGGCCTATGACGTCGCGGCCCTTCACTTCAGGGGCCGCGACGCCAGGCTTAACTTCCCCGAGCTCACGGCCACCCTCCCGCGCCCTCTCAGCAACAATGCCGACCACATACGAATGGCCGCGCACGAGGCTGCCCTCAGGCTTAGGACTAATACTGCGGCTGTTGAGTCAGGTGACAATATTTTATCGCCTGGCTCGGCCAACGCAGTGCCGGTCACGGTGAGACTATCCCCAACGCAGATTCAAGCCATCAATGACTCCCCTTTGGACTCACCCAAGTCGTGGATGCAAATGCCGGACACATTCATGATGGATGATTCAATGATGTTTGCAAATAATGGGTATGATCAAACTTTTGATGAGGAAAATGTGCAGTGGAATGATTCCCTTTGGGATCCTTAG 573 0.5532 MDMPSSSSNHHNPTGPATSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGRDARLNFPELTATLPRPLSNNADHIRMAAHEAALRLRTNTAAVESGDNILSPGSANAVPVTVRLSPTQIQAINDSPLDSPKSWMQMPDTFMMDDSMMFANNGYDQTFDEENVQWNDSLWDP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1489 190 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Ahy5g1489 190 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Ahy5g1489 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 12 189 - -
Ahy5g1489 190 MobiDBLite consensus disorder prediction 1 16 - -
Ahy5g1489 190 Pfam AP2 domain 21 69 IPR001471 GO:0003700|GO:0006355
Ahy5g1489 190 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Ahy5g1489 190 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Ahy5g1489 190 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Ahy5g1489 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 189 - -
Ahy5g1489 190 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Ahy5g1489 190 MobiDBLite consensus disorder prediction 1 23 - -
Ahy5g1489 190 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1489 Ahy-Chr5 39878531 39880182 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1489 19 190 AP2-EREBP Transcription Factor Family AT1G71450 61.047 4.09e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy5g1489 AP2 3.80E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1489 - - aip:110271937 293.123