Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1430 ATGCACCCCACGTGTTTGATTTTTGGTCTGGAAGCCTTAAATAGCACTGGTGGAGGCGGTGGAGTTGGAGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTTGTAGTGGTGGTGGGGCAGGGATGATGAGTAGTACTAGCAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTTATCCCCATTCAGAAGAGCTTTGACTCTATTTCCCATTCCTTCTTCCACCACCCTGCTCCTTTCTGCTGTTGTAACAATCTTGCTGTGAGTTATTGTTCTTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGAACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCGGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCTATGACACAGTCATCATCCACTGTGACATCACTGACTGCTACAACTGGTGGCAGCAGTGGAACTGGAAGTTACCAGAACCTTAACACAATTACCTTTGCTAATCCTCAAGGCACTGGTTCTGGAGCTGAACAGACACATTATCATTTGGATTCTATCCCCTATGGGATTCCAAGCAGAGAGTACAGGTATCTTCAGGGAAATAAATCAGAGGGTGGCGAACAGAGTTTCTTTTCCAAAGCTTTAGGAAGCAACAAGGAACTTCGGATCGAAACGCAGCTGGAAAACACTTTGATGCCAACCAGAGTTGCCTCCTTCTCAACATCAAGATCAAACAACAACTCCATTTTGCCGGGTGATTATCTGCAGAATTCATATTTATCCGACGAGCATGCATCGGGTGAATCTGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTTGATGAATGGCCTAGGAGCAGGGATTCATGGTCTGGTCTGGAAGCAACTCAGCTGTCCATGTCCATTCCTATGTCGGCGTCGAACTTCTCTACAGCCAGCTCTCAATCCTCGCATGGCGAGACTAAATAA 1065 0.4836 MHPTCLIFGLEALNSTGGGGGVGVGVGGGGGGGCSGGGAGMMSSTSRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISHSFFHHPAPFCCCNNLAVSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQSMTQSSSTVTSLTATTGGSSGTGSYQNLNTITFANPQGTGSGAEQTHYHLDSIPYGIPSREYRYLQGNKSEGGEQSFFSKALGSNKELRIETQLENTLMPTRVASFSTSRSNNNSILPGDYLQNSYLSDEHASGESVKHEGQSLRPFFDEWPRSRDSWSGLEATQLSMSIPMSASNFSTASSQSSHGETK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1430 354 PANTHER - 46 345 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy5g1430 354 Pfam WRC 120 162 IPR014977 -
Ahy5g1430 354 PANTHER GROWTH-REGULATING FACTOR 5 46 345 - -
Ahy5g1430 354 Pfam QLQ 49 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy5g1430 354 SMART QLQ_2 48 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy5g1430 354 MobiDBLite consensus disorder prediction 160 185 - -
Ahy5g1430 354 ProSiteProfiles WRC domain profile. 119 163 IPR014977 -
Ahy5g1430 354 ProSiteProfiles QLQ domain profile. 49 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy5g1430 354 MobiDBLite consensus disorder prediction 146 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1430 Ahy-Chr5 38228116 38232081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1430 47 162 GRF Transcription Factor Family AT3G13960 61.017 1.12e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy5g1430 WRC 1.90E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1430 - - ahf:112749828 633.254