Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1418 ATGTTCTCTTCCTCCAACCCTTCTTCTTCCTCTTCTTCTTACCCTCCTCTTCTTCATCCCTTCTATGTTGATGATTCTCACAATGATAGCAATGCTTTTGTTGTTGCTAATAGTGATGGAAGTATGTTTGACCCATCTTCATCTCTTGGTACTACTACTCATCAAGCTCCATTACTGTTCCCAGCAGCAACAAATCTGAATGTTGCTGACTATGCTGCCATGCTCCAAAGGGACTGTTCTTATTATGATTATGGTGGTGGTGCTAGTGCTGGTGGTGTTGTGGGTGGTCATAATGGTCTGAACTTGTTGACAAAGAAAGGGAAGAAAGACAGGCACAGCAAGATTTTTACATCTCAGGGTTTGAGAGACAGAAGGGTGAGGCTTTCAAGCGAGATTGCTAGAAAGTTCTTTGATCTTCAGGACATGCTTGAGTATGACAAACCCAGCAACACCCTCCAATGGCTCTTCACTAAATCTGAGAATGCTATCAGAGAGCTTCAAAGAACCAAGCAAGCTAATCCCACCACCTGTTCTCATCATGATCATCACACCTTCTGCTTCACCTGCTTCTCATCATCAAAGGACAAGAGATTCCCTCCTCCAGATTCATCAGATCCTCATCATCATCATCATCAACTTATGGATGTTGAGCTTCAAGACCCTAATCTACTAAGAACCAATTTCATGAGCCTTGAGATCCCTCAACATCAGGAAGCTAGTTTCAACAACATTAATAACAATAACAACCACTCCCCTCCCAATTGGAATTTATACCAATGA 780 0.4231 MFSSSNPSSSSSSYPPLLHPFYVDDSHNDSNAFVVANSDGSMFDPSSSLGTTTHQAPLLFPAATNLNVADYAAMLQRDCSYYDYGGGASAGGVVGGHNGLNLLTKKGKKDRHSKIFTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSNTLQWLFTKSENAIRELQRTKQANPTTCSHHDHHTFCFTCFSSSKDKRFPPPDSSDPHHHHHQLMDVELQDPNLLRTNFMSLEIPQHQEASFNNINNNNNHSPPNWNLYQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1418 259 PANTHER TRANSCRIPTION FACTOR TCP12 105 180 - -
Ahy5g1418 259 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 105 180 IPR005333 GO:0003700
Ahy5g1418 259 ProSiteProfiles TCP domain profile. 108 166 IPR017887 -
Ahy5g1418 259 Pfam TCP family transcription factor 107 207 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1418 Ahy-Chr5 38021119 38022848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1418 103 173 TCP Transcription Factor Family AT1G67260 63.380 3.70e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy5g1418 TCP 3.90E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1418 - - aip:107640299 412.92