Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1414 ATGTCTCAAACCTTTGATTACCTGGCTGATTTAAATGCAAGAAAACTGCAATGGAATTTCAAAGTATATGTAATACGTGTGTGGCAACTCCCTAACAGATACAATGAAGGAGAAGTTGGCACCATTGAAGTGATTATTGAAGATAGTCAGGGCACAAGGTTGCAAGTCTCGATCCCTAAATCCCTGGTGAGCAAGTGGCGGGGTGTCTTGGTTCAGTTTCAAATGTACATTATGACCAACTTCATTGTTGTTGACAACCAAAAGGGTAACATATCAAGGGGAAAGTATTTATTATTCTTCAGTCATAGGACAATCGTCAGTCATGTTGAGAATCCCAGTTTTTCGCTAAATGCTTTTCGATTTAGAACCATCCGTGAGTTACTAAATGCTGAGAAGATCGATGACTCTGCATTGTTTGACATGATTGGTGAAGTAGTTGGTAAAGAAGATCCAAAAGAGTTGATCACCAGCAAAGGAAAGGAGACTAAACGACTGGCTGTTATCTTGGAGGACCTAGAAAACAATAGGATTGGGTGCACTATATTTGGTGAAATGGTTGACCAGCTACTTCGTCACATGCAAGATGGAAGGGTTGAGCCACTAATAGTTGTGGTCCAGTATTTTAAGGCAACCAGATGGAATGGCAAGACATCTGTCCAAAGCCATTTTGACATTTCACAGCTGCACATAGACTCCAACCTTAAAGATGTTGCTGAATTTAGGAGCAGGCTACTTGGCGGTGAACCATCATCCTCTGTGAGGATTAGTCAAGTTCCATCAAAAACAGCTTGGTCAGGGGTTGAGGAGCTTAAACAAGGTGCTGTGTCAGTGAAAACAATTGAAGAAGTCCTTATCCAACATGAGGAAGGTCCAGCTTGGATTGCTGCAAGTATTGTTGCGATTAATGTTACGAAGGATGATTGGTTCTATAAATCATGTAGAAAATGTCCAAAGAAAGTAGAAACTCCTATTGGAAACAGATATGAATGTGGGAAGTTCAAAGTCGAGGTGATGGTTTTTGATGGAACCGGTAGCATCCGATTGCTACTATGGGACAAGGAAACAAGTATGCTATGTGGGAAAAGAGCTGAACAGATTATGGAGGACGATGTTATAGTGGGAGATGAATATCCCAAAACACTTGATAACATGATGGAAAAAAGAGTCCTTTTCAAGATAAATATCAAAGAAGCCAACATTAATCAATTTGATCATGTGTACACGGTTATGAAAATCTGTGATGATGAGGATATCATTGACAAAAATCTTTCCAAAGAGTTGTCTACTAATCTTCCGAGTAATGTCAGTGTAAGTTCTTTAGGCCAAGTTCAAATACCCCATTTACAAGATGCTCCAAAGGAACTATACAATTTGTTGTATGAAGATAGTCCTAAAAGCAAGCACTTTCGTGACAACATTAGAGCTTATAATAACATGTTCCAATTCACTTCAATGGGTGCAAAGATAGACCGAAGCATCAATCGCAGCAAAGGACCGGCTACCTTCATTCTCTGTGGAGAAAATTATCACTTGATGGGTAGCCTCATACCACCAGAAGGCAATGTCGCCAAGTTTGCTCAGCTATATGTGTATGATACACAGAATGAAATCCAGAATCGTATGAACATTTTCAGCAGAGCAGAAAACCAGTTAATTCATGAAGATATTGTAAAGGATTTAAAGAAGATGCTAGACGAGCACAATGTCCTGGTAAAGGCCTTTCGTATGGTTAGGGAGTCGATGAGAGTTGACTCACGTAATTCTGTGAAGCTTAGGCTCTTGGGTAAAAGGGGTAAGGATGGTAGACGCTATAATCTTCCGTCAACAAATGAGATTGCTGCATTAATAGTGGGTGATTTTGATATTGATAACAATGACAGAGACATTGTCGTAGAGACACAGACTGGGAAATTACAACGGATTAATCAACTTAATCCAGCTTATCTTGGATTACAATACCCTCTTTTATTTCCTTATGGTGAGGATGGTTTCAAGGAAGATATCTCTCTCAGCAAACCTACATCTAATGATGGAAAAGGGAGACAACACATGTCTATGAGAGAATTTTTTGCTTTTAGAATACAAGAGAGACTAGCAGATGGATCTCCATTGTTGTATTCAAGGAGGCTCTTCCAACAGTTCTTGGTGGATGCTTATTCAATGATTGAATCATCTAGATTGAATTATATACGTCATAATCAAGACAAATTTAGATGTGAAATGTACAAACAAATAAAAGATGCTGTTTTGAATGGTGAAACTACACCCTCATGTAAAGGGAAGCGAATTATACTACCTTCTTCATTTACTGGTGGTCCTAGGTATATGATACAGAATTATCAAGATGCAATGGCAATTTGCAAAGTTGTGGGTTATCCAGACCTATTTATTACATTTACATGTAATCCTAAATGGCCAGAGCTTGAAGATTTTTTTGACAATAGAGAACTACGTGCAGAAGATAGACCAGACATGGTTTGCAGGGCTTTTAAGGTGAAGTTGGATTGTCTCATCAAGGACATCAAAGCAAATCGCATTTTTGGGAGGGTTAGTGCAGATGATAAGTATCCCACTGGAGAAGAGATAGACCAGATTATTTCAGCTGAGATTCCAGATAGAGAAAAAGATCCTGTTTATTTTGATGCCGTTGAAAAACATATGATGCATGGTCCATGTGGCAATTTTAGAAAACAATCACCGTGCATGGAAAATGGAAAATGCATAAGGCACTTTCCAAAAAGATTTGTTGATGAGACAACAGTTGATGAAGATGGCTATCCATTATACAGGCGCAGAGATGATGGGAGAATTATTAATAAAAGTGGTGTTGATCTCGATAACCGTTACGTAGTCCCACATAATAGGTTTTTGCTGCTGAGGTATGGTGCACACATTAATGTTGAGTGGTGTAATCAATCGAGATCAATTAAATATTTGTTTAAGTATGTGAATAAAGGGAATGATCGTGTAACTACTGCATTTTACAAAAGTGTTGGTGAAGACGTAGAAAGTGATGAAATCGATGAGATTAGTATGTACTATGATTGTAGATACATATCTCCATGTGAAGCAGTTTGGAGGATTTTCGGTTATAGCATTCACTATAGAGATCCTTCAGTCGTTAGGTTGGGGTTTCATTTGCCGGATGAGCAAAATGTGATATTCAAAGACCATGACAACTTAGATGAGGTAGCTAGAGAGGCTTCGGTAAAGGAATCTATGTTTCTTGGTTGGTTTGAAGCAAATAAAGAATATCGAGAGGCTAGGTCCCTAACATTTGCTGAGCTTCCTACTAAGTTTGTATGGAAAGCCCAACAACGGATATGGGTTCCACGAAAATCGCATGCAGTCATTGGAAGAATTTTTTTTGTGCCTCCTGGATCTGGTGAAATTTACTATTTAAGACTACTGTTGAATTTAGTCAAAGGCCCTACTTGCTATGAAGATATCAGAACTGTTGACGGAACTGTGTACTCAACTTTCAGAGATGCATGTTATGCACGTGGCCTTTTAGATGATGACAGAGAATATATTGATGCAATACAAGAAGCAAATAATTGGGGTTCCGGAGAATATTTGAGAAAATTGTTTGCAACACTTTTGTTTTCAAATTCTATGACAAGGCCAGAATATGTATGGGACAACACGTGGCATATTTTATCTGATGATATTCTACATAGGCAAAAGAGAATTCTTGACAATCCAGATTTAAGTTTAACAGAGCAGGAATTGAAGGATCTAACTCTTATAGATATTGAGAATAAATTGAAGACTTACAACAAGAGTCTAAAAGAGTTCTCTTCCATGCCATTTCCAGATATGGAAATGTGTTCCTCTCATTTGGTTTCAAGCGGCATCAATCGGTTAATTTCTGATGAGCAACAATATGATAGACACAGATTAGCTGATGAACATAGCCTTTATTTACAACAGCTGACAGATGAACAACACCATGTTTATGATAGGATTATACAATCTGTCAATGATGGAGTAGGTGGTGTTTACTTTTTATATGGATATGGTGGAACAGGAAAAACTTTTGTTTGGAAGACATTGGCATCAGGGTTAAGATCAAGAGGTCAAATTGTCTTGACGGTGGCTTCAAGTGGCATAGCTGCTTTGTTATTACCGGGTGGTAGAACAGCTCATTCAAGATTTGCAATACCACTTAATGTTGATGAGTTTTCCACTTGCAATATAAAACAGGGCAGTGCATTGGCAGAATTGATTATAAAAACAAAACTTATTATTTGGGATGAAGCTCCCATGGTCAATAAGCATTGTATAGAAGCACTTGATAGGACAATGCGAGATTTATTGAGATTCAAGAATGTTCATAGTGAAGAGCAACCTTTTGGAGGGAAAACAATTGTGTTTGGTGGTGACTTTAGACAGATACTCCCTGTTATACCCAAAGGAAGCAGGCAGGATATTATGAATGCGACTATCAATTCATCCTACATTTGGAATAGTTGCAACATGTTGAAACTAACAAGAAATATGCGGCTACAAGCGGATGATGCTAATGTACATTCGTCTGAGTTAAAGGATTTTGCAGAATGGATACTAAGCATTGGCGATGGTAAATGCGGGGAGTCTAAAGATGGAATTGATACAATTCAAATTCCCAATGACATTCTGATAAAAGAATGGGAGGATCCTATAGCTGCTATATGTAGAGCAATTTATCCCGAGATGTTCTGGCCTTCAAATTCTGTCTATGAAGTCGAAGATCGAGCTATCCTTGCCCCAACATTGCAAATAGTAGATGAGATTAATCGATACATGATGAGTTTAAATCCATGTGAATCACAAACATACTATAGTTCTGACAAAGCATGTCCAACAGAGCCATCTAATGAGTTAATTGCATCAATACACACTCCAGAATTTCTAAACACAATTAGGTGTTCGGGGATTCCAAACCATGAGTTGACAGTCAAGGTAGGAACACCTATCATGTTACTATGGAATATTGATCACTCGGCTGGATTATGCAATGGAACCCGATTGGTGATAACAAAGCTAGGAAAACACATTATTGAAGCTAAAAGCATGACAGGAAAGAATGCTGGTCAGAAAGTTTTTATTCCAAGGATGACCCTTAGTCCATCTGACCATAGAATACCATTTAAGTTTCAACGCAGACAGTTCCCTATAATGGTATCCTATGCCATGACAATTAATAAGAGTCAAGGACAATCCTTATCAAAAGTTGGATTGATTTTAAAGAAGCCTGTTTTTACCCACGGACAATTGTATGTGGCTATTTCGAGAGTTACAAATAAAAAAGGTCTTAAGATACTCTTATGTCATGAAGAAGAAAGGAGCAATGAGACAGATAATGTTGTTTTCAAAGAAGTGTTTAGGAATGTTTGA 5379 0.3806 MSQTFDYLADLNARKLQWNFKVYVIRVWQLPNRYNEGEVGTIEVIIEDSQGTRLQVSIPKSLVSKWRGVLVQFQMYIMTNFIVVDNQKGNISRGKYLLFFSHRTIVSHVENPSFSLNAFRFRTIRELLNAEKIDDSALFDMIGEVVGKEDPKELITSKGKETKRLAVILEDLENNRIGCTIFGEMVDQLLRHMQDGRVEPLIVVVQYFKATRWNGKTSVQSHFDISQLHIDSNLKDVAEFRSRLLGGEPSSSVRISQVPSKTAWSGVEELKQGAVSVKTIEEVLIQHEEGPAWIAASIVAINVTKDDWFYKSCRKCPKKVETPIGNRYECGKFKVEVMVFDGTGSIRLLLWDKETSMLCGKRAEQIMEDDVIVGDEYPKTLDNMMEKRVLFKINIKEANINQFDHVYTVMKICDDEDIIDKNLSKELSTNLPSNVSVSSLGQVQIPHLQDAPKELYNLLYEDSPKSKHFRDNIRAYNNMFQFTSMGAKIDRSINRSKGPATFILCGENYHLMGSLIPPEGNVAKFAQLYVYDTQNEIQNRMNIFSRAENQLIHEDIVKDLKKMLDEHNVLVKAFRMVRESMRVDSRNSVKLRLLGKRGKDGRRYNLPSTNEIAALIVGDFDIDNNDRDIVVETQTGKLQRINQLNPAYLGLQYPLLFPYGEDGFKEDISLSKPTSNDGKGRQHMSMREFFAFRIQERLADGSPLLYSRRLFQQFLVDAYSMIESSRLNYIRHNQDKFRCEMYKQIKDAVLNGETTPSCKGKRIILPSSFTGGPRYMIQNYQDAMAICKVVGYPDLFITFTCNPKWPELEDFFDNRELRAEDRPDMVCRAFKVKLDCLIKDIKANRIFGRVSADDKYPTGEEIDQIISAEIPDREKDPVYFDAVEKHMMHGPCGNFRKQSPCMENGKCIRHFPKRFVDETTVDEDGYPLYRRRDDGRIINKSGVDLDNRYVVPHNRFLLLRYGAHINVEWCNQSRSIKYLFKYVNKGNDRVTTAFYKSVGEDVESDEIDEISMYYDCRYISPCEAVWRIFGYSIHYRDPSVVRLGFHLPDEQNVIFKDHDNLDEVAREASVKESMFLGWFEANKEYREARSLTFAELPTKFVWKAQQRIWVPRKSHAVIGRIFFVPPGSGEIYYLRLLLNLVKGPTCYEDIRTVDGTVYSTFRDACYARGLLDDDREYIDAIQEANNWGSGEYLRKLFATLLFSNSMTRPEYVWDNTWHILSDDILHRQKRILDNPDLSLTEQELKDLTLIDIENKLKTYNKSLKEFSSMPFPDMEMCSSHLVSSGINRLISDEQQYDRHRLADEHSLYLQQLTDEQHHVYDRIIQSVNDGVGGVYFLYGYGGTGKTFVWKTLASGLRSRGQIVLTVASSGIAALLLPGGRTAHSRFAIPLNVDEFSTCNIKQGSALAELIIKTKLIIWDEAPMVNKHCIEALDRTMRDLLRFKNVHSEEQPFGGKTIVFGGDFRQILPVIPKGSRQDIMNATINSSYIWNSCNMLKLTRNMRLQADDANVHSSELKDFAEWILSIGDGKCGESKDGIDTIQIPNDILIKEWEDPIAAICRAIYPEMFWPSNSVYEVEDRAILAPTLQIVDEINRYMMSLNPCESQTYYSSDKACPTEPSNELIASIHTPEFLNTIRCSGIPNHELTVKVGTPIMLLWNIDHSAGLCNGTRLVITKLGKHIIEAKSMTGKNAGQKVFIPRMTLSPSDHRIPFKFQRRQFPIMVSYAMTINKSQGQSLSKVGLILKKPVFTHGQLYVAISRVTNKKGLKILLCHEEERSNETDNVVFKEVFRNV* 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1414 1792 Pfam PIF1-like helicase 1311 1676 IPR010285 GO:0000723|GO:0003678|GO:0006281
Ahy5g1414 1792 Gene3D - 4 108 IPR012340 -
Ahy5g1414 1792 Pfam Helitron helicase-like domain at N-terminus 689 852 IPR025476 -
Ahy5g1414 1792 Gene3D - 1308 1498 IPR027417 -
Ahy5g1414 1792 CDD RPA1_DBD_B_like 140 244 - -
Ahy5g1414 1792 PANTHER ATP-DEPENDENT DNA HELICASE 506 1767 - -
Ahy5g1414 1792 SUPERFAMILY Nucleic acid-binding proteins 120 244 IPR012340 -
Ahy5g1414 1792 PANTHER UNCHARACTERIZED 506 1767 - -
Ahy5g1414 1792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1450 1773 IPR027417 -
Ahy5g1414 1792 SUPERFAMILY Nucleic acid-binding proteins 5 114 IPR012340 -
Ahy5g1414 1792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1502 IPR027417 -
Ahy5g1414 1792 SUPERFAMILY Nucleic acid-binding proteins 277 414 IPR012340 -
Ahy5g1414 1792 Gene3D - 262 427 IPR012340 -
Ahy5g1414 1792 Gene3D - 114 249 IPR012340 -
Ahy5g1414 1792 CDD RPA1_DBD_C 277 412 IPR013955 -
Ahy5g1414 1792 CDD SF1_C_RecD 1723 1766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1414 Ahy-Chr5 37950884 37958028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1414 8 336 Core DNA Replication Machinery Family AT2G06510 23.563 1.05e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1414 - - ahf:112803472 3597.75