Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1401 ATGGTCATGGACACGCCGGAGAGGAACCAGATCAACCCTTCCCTCTCTCGTGTCCAGGATTCCCCTGTATTCAATTTCCTCAACGGTTTGTCGCCTATAAAGACCGAGAAGCCTGCTCAGATTGGTCAAACGTTTAGCTCGCTTAGCTTTCCATCCCCTCCGCGTGCTTTTGCTTCACCCAATCTTACCAGTTTCAAGGAATCAAAAGTGCTCAAGAGGCATAACCCTTTTGGGAAATCAAGTGACGTGGCTATTGCAGATTCATTTCATCCATATCATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGCAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAAACTTCTCAGCTGAGATACCACAGGCCTTAAAATATAATAATTGGGGTAACCCTGGCTATGATCCTAGTCATGAGGATAACTCTCTTGATTCAATTGAAGTCCTTAATCAGGAGTCGGGTGAATTTGATCCGAAGGGGCAAGAATTAGAGCATTGGGATAATTTAATCTCTGGAGATACTGACTTCTTCGTTTTCAATTCCCCAAATGAAGCAGCGGCTTTTAAGGATATAATGCAGAAGCCAGATTCCCATCTTATGCCTCTGGTACCGGAATCTTCCATATATAATGGTTTGAGCGATGATAGCAAAGCTAAAATAGAAGACTATCGTCCCGAGCCTTTAGCAGTCACAGACCAAATGCAGGACAAACATTACGTTGCCATGACTAGCAATACAAAGGAGAAAGCAGATGCTGAGTTTGCTTCTGTGATGAACCATAATAAGCGGAGGCGATGTCTAGACTTTGAGACGGCCAGTGTGCAAAGGAAGAACTCAGATCATAATTTAAAATCCGATTCTCTTGTACATTCTAATGAAAAGCAACTGGTTGCTGTAAAATGCAATAGCAGTTCACAGCAATGCAATATGCCTGCAGTTGGCTTAGATTTGAATGCACTTGCAGCCTTGAAGGGAGACAAAAAAGTCATAAGTAATGACAATTGGCCTTGTGAAATTCATGTTAATCTTCCTAGTTGCACTTCAGTGCAAATCTATACCAGTCATGAACATCATGATCCATTGGCAGTGGAGGTGGATTCATCAGACATTGGGCCTCAGCCAGTTGAGGATAGTTCCCATGCATCAGATTTCACTGTTGATGAAGATGTCAATCAGAATAGTCCCCAAAAGAAAACACATGGAGACTGCAAGCGTTGTAACTGTAAAAAGTCAAAGTGCTTGAAGCTATATTGTGAGTGCTTTGCTGCTCGTACCTACTGCACTGGCAACTGCTCATGTAAGAATTGCCACAACAAACTTGATCATAAAGACGAAGTCCTTCAAGCTCGCAAGCAGATTGAGTCTCGCAACCCTCTGGCTTTTACTCCTAAAGTCATTCCTGAACCTGAAATTGGGAATGACCCAAATAAAACTCCAGCACCATCACGACACAAGAGAGGATGCAACTGCAAGAAATCATCCTGCCAAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGTTCCATAAACTGTAGATGCGACACGTGTAAGAACACGTTTGGTAGAAAGGACGGAGTAGAAATTCAAGCAGAAGTAGAAATAGAGACATGTGGTAAAGAGGTGGTTGAAAATTCATCCCAGAAAATTGAAATTCAGAATTCGAATGGGATGTCTAGTTCATTGAATTTTCTGTCAGAGGAAAGGATGTTTGGGACTCTTTGTTCTCAGCCAACTGTTTCAGACCAGGAAAGGATAGATATTCTTGGAGGCAGAGGTAGAAATGGATAG 1812 0.4244 MVMDTPERNQINPSLSRVQDSPVFNFLNGLSPIKTEKPAQIGQTFSSLSFPSPPRAFASPNLTSFKESKVLKRHNPFGKSSDVAIADSFHPYHNSRESQGNFHDGISAVDDSIALPGEHTNFSAEIPQALKYNNWGNPGYDPSHEDNSLDSIEVLNQESGEFDPKGQELEHWDNLISGDTDFFVFNSPNEAAAFKDIMQKPDSHLMPLVPESSIYNGLSDDSKAKIEDYRPEPLAVTDQMQDKHYVAMTSNTKEKADAEFASVMNHNKRRRCLDFETASVQRKNSDHNLKSDSLVHSNEKQLVAVKCNSSSQQCNMPAVGLDLNALAALKGDKKVISNDNWPCEIHVNLPSCTSVQIYTSHEHHDPLAVEVDSSDIGPQPVEDSSHASDFTVDEDVNQNSPQKKTHGDCKRCNCKKSKCLKLYCECFAARTYCTGNCSCKNCHNKLDHKDEVLQARKQIESRNPLAFTPKVIPEPEIGNDPNKTPAPSRHKRGCNCKKSSCQKKYCECFQAGVGCSINCRCDTCKNTFGRKDGVEIQAEVEIETCGKEVVENSSQKIEIQNSNGMSSSLNFLSEERMFGTLCSQPTVSDQERIDILGGRGRNG* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1401 603 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 562 - -
Ahy5g1401 603 SMART CXC_2 407 448 IPR033467 -
Ahy5g1401 603 SMART CXC_2 489 530 IPR033467 -
Ahy5g1401 603 MobiDBLite consensus disorder prediction 373 399 - -
Ahy5g1401 603 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 3 562 IPR044522 GO:0003700
Ahy5g1401 603 ProSiteProfiles CRC domain profile. 408 529 IPR005172 -
Ahy5g1401 603 MobiDBLite consensus disorder prediction 378 398 - -
Ahy5g1401 603 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 492 527 IPR005172 -
Ahy5g1401 603 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 410 445 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1401 Ahy-Chr5 37832030 37835400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1401 18 569 CPP Transcription Factor Family AT4G14770 37.201 7.10e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy5g1401 TCR 2.50E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1401 - - aip:107640306 1077