Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1392 ATGGCTTCTTATTACCTTGATCTATTAATACATTGGGTTTTCATTGTTGTCATTCTTCTCATATCCCTGAAGCTTAAACCATTAGAGTCACAGAAATTAAATAATCCAAGACTGATGCAAGCTCATGCAGCACTTGAAGCATGGACACATTGCATGACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACCGGCATCTACTGTGCACCAGCACCAGATGACTCCACCATTTTTACAGTGGCTGGAATTGACCTTAAGAATGCAAACATATCTGGTTCATTACCTGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAATAGATTCACCGGTCCACTCCCTGAGAATTTTACCAAACTTGCTTATCTTTATGAGCTTGATATCAGTTTTAACCAATTCTCAGGACCCTTCCCACAAGTTGTTCTTGCCATTCCTTCCCTGAGATACTTGGATATCAGGTTCAACAACTTTGCCGGCGACGTTCCTTCGAGCCTTTTCGACCTCAAACTCGACGCTCTTTTCATCAACAATAACAAATTCCAGTTCTCCTTACCACAAAACTTTGGGAACTCACCAGTTTCTGTTATGATATTATCAAACAATGATATAAAGGGTAGTATTCCATCAAGTGTGGCCAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACGGGACTAACGGGTCCATTACCCCAAGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAACTACCTGGAACCATGCAAGGAATGAAGAGCTTGGAACAGTTAGTTTTAAAGCATAACAATTTCTCAGGTGTGGTTCCTACCAGCATTTGTATGTTGCCTAAGTTGAAGCACTTTGATTGTTCAAATAATTACTTCCATGGTCCATTCCCAAAATGTCCCTTCATTAAACGAAAGCACAATCCGGGAAAATTCATGGGTTTCTAG 1008 0.4067 MASYYLDLLIHWVFIVVILLISLKLKPLESQKLNNPRLMQAHAALEAWTHCMTSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTIFTVAGIDLKNANISGSLPEDLGLLTDLDFFHINSNRFTGPLPENFTKLAYLYELDISFNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDVPSSLFDLKLDALFINNNKFQFSLPQNFGNSPVSVMILSNNDIKGSIPSSVAKMKDTLNEIIISNTGLTGPLPQEIGYLDKVTVFDVSFNRLEGELPGTMQGMKSLEQLVLKHNNFSGVVPTSICMLPKLKHFDCSNNYFHGPFPKCPFIKRKHNPGKFMGF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1392 335 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 24 326 - -
Ahy5g1392 335 Gene3D Ribonuclease Inhibitor 39 204 IPR032675 -
Ahy5g1392 335 SUPERFAMILY L domain-like 52 318 - -
Ahy5g1392 335 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 326 - -
Ahy5g1392 335 Pfam Leucine rich repeat 255 312 IPR001611 GO:0005515
Ahy5g1392 335 Gene3D Ribonuclease Inhibitor 205 330 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1392 Ahy-Chr5 37675494 37676501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1392 33 320 Leucine-rich Repeat extension Gene Families AT3G22800 61.592 1.87e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1392 - - ahf:112748057 665.996