Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1370 ATGTCCATAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGAAGACAACAATGTAGATTTGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTAGAGGATATTTGGAACCTGGAATTTAGGACAGAGGATAAGGCCTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAAGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGTTGGAGGAATATGAGGTATCTTGATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTATGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACAATCTGACGCCACCCCAATTTGCACATCTGGTTCCGGCCAATCGTCGTCTCACTGTCACTGATAAAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATAGGGTATATTGCATTCCAGAAGAGTGGATATTGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCATCGGTCAAAAGTTAAAAACGGGGATACCAATGCAGCAATAAACTATTTGATTGGCAAGTCAAACAACGATTCACTGTTCTTTGGAAAGTATACGTTCACTAGTGACAAAAGGCTCGAGCATATTTTCGGGCAGATGGGCAGTCAATTATCGACTATCACTACTTTAGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGAGTGTTATCTTTGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGTAAAACCTTTGCTGAAGCGATGGGTGGGAAAAGTCCTAAAGTAGTAATAATTGACAGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGGTGCGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCCGCATTATCTTAAGGGTCTTTTATACAACAACAACGACCACAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATTGAAAAGACGTACGAAACTCGAGCGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCAGTTACATAAGGACGACATCACAGTGCGAAGGTATAAATTATCTCATCAGATTTTAG 1395 0.4151 MSINEDDVKNDSDNDLGDDFDYQPNAEDDAEDNNVDLLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDKACQFYNAYSCWHGFVMKKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHNLTPPQFAHLVPANRRLTVTDKVQVENLHNFGVKTCHIIGYIAFQKSGYCHAGFTRKDLYNHIDRYHRSKVKNGDTNAAINYLIGKSNNDSLFFGKYTFTSDKRLEHIFGQMGSQLSTITTLEILLPLIQPTRRINTTSLWSFSPDAIITGRVLSLAPAYYPTKPQRRISGCCKTFAEAMGGKSPKVVIIDRDLAMRDAIKNVLPGATHRLCGWHLQRNACENIKNPNFPHYLKGLLYNNNDHRDFDRRWAAILDKHNLVGSTWIEKTYETRAMWSHCFLRDKFFSYIRTTSQCEGINYLIRF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1370 464 MobiDBLite consensus disorder prediction 11 34 - -
Ahy5g1370 464 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 335 459 IPR031052 GO:0006355
Ahy5g1370 464 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 270 IPR031052 GO:0006355
Ahy5g1370 464 Pfam MULE transposase domain 335 380 IPR018289 -
Ahy5g1370 464 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy5g1370 464 MobiDBLite consensus disorder prediction 1 34 - -
Ahy5g1370 464 PANTHER OS03G0181600 PROTEIN 335 459 - -
Ahy5g1370 464 PANTHER OS03G0181600 PROTEIN 57 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1370 Ahy-Chr5 37312131 37313525 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1370 FAR1 3.20E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1370 - - ahf:112803459 938.717