Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1345 ATGGCTAACCAGCAACAACAACCTCTTCTAAGCAATAATAATAAGACTCCGAAATTCCTATCCCTTCTCCTCACTACTGTAGTTGGAATTGGTGTCCTTGCCTCATCATCCCTTATTGCTAATTCATATCTCAGCACCAAACCCAGTTCCGATCTCTGTCAACACGCCGTTAACAGAGCAACCTGCTTGGCCCATGTCTCCGAAATAGCTCAAGGTCACATCCTGGCAACCACAAAAGACAACTACAATCTTCTCCAATCCTTCCTTGTCAAGTCCACCTCAGGCATCCAAGAAGCCATGACCACAGTCAACGCCGTCAAGATCCGCCTCAACGCCACTCCACGCCAGGAAGCAGCCTTGCAAGTCTGTGCAGACCTCATGGACTTGTCCATTTCCAGAGTCTATGACTCCGTGGTGGCTCTCACTAAGCGCACCACTCTTTCCCTGCAAGACGCGCACACGTGGCTGAGCAGCGTCCTCACTAACCATGCCACTTGCTTGGATGGATTAGATGGCTCTGCTCGTGCCATTATGGAGCCTCAACTCTCGGACCTCATGTCCAGGGCAAGAACCTCTCTCGCCATGTTTGTTGCAGTCTTGCCAACGAAGGCCCATCAGCACCAACTCCTTGAGGAGCCACTCAACCGAGAGTTTCCCTCATGGGTCACACGCACCGATCGGAGGCTTTTGGAGTCTGTGGCTGCTGATATAAAGGCTAATGTTGTGGTGGCCAAGGATGGAAGCGGCAAGTTCAAGACGGTGGCGGAGGCTGTGGCTTCTGCACCTGATAACGGTAAAACAAGGTACGTAATATATGTGAAGAAGGGAACGTACAAAGAGAATGTTGAGATCAGTTCAAAGAAGAAGAACGTCATGCTTGTTGGTGACGGTATGGATGCAACCATTATCACCGGCAGCTTGAACTTTGTCGATGGAACTGGCACCTTCCAATCCGCCACCGTCGCCGCCGTTGGTGATGGGTTTATAGGGCAAGACATTTGGTTTCAAAACACGGCAGGGCCAGAGAAGCACCAGGCGGTGGCACTCCGTGTGGGAGCGGACACCTCCGTGATCAACCGGTGCCGCATCGATGCCTACCAGGACACTCTGTACACCCACAGCAACAGGCAGTTCTACCGTGATTGCGTCATCACCGGCACTATCGACTTCATCTTTGGAAATGCTGCTGTTGTGTTCCAGAATTGCAACCTGGTGGCTCGAAAGCCCATGAGCAACCAAAAGAACATGGTGACGGCCCAAGGACGCGAAGACCCCAACCAAAACACAGGGACCTCCATTCAGCAGTGCAAAATAACAGCGAGTTCGGATCTGAAGCCCGTGGTGGGGTCCATCAAGACTTATCTGGGGCGGCCATGGAAGAAGTATTCAAGAACGGTTGTGATGCAATCTTCAATAGATGGGCATATTGACCCCGCAGGATGGTCTGAATGGGATGATAAGACTAAGGACTATTTGGAAACTCTGTATTATGGAGAGTACATGAACAGTGGTGCTGGTGCTGGCACCAGCAAGAGGGTTACGTGGCCTGGTTACCACATCATCACCAGTGCCGCAGAGGCTAGCAAGTTCACAGTGGCTCAGCTCATCCAAGGCGATGTTTGGTTGCAGAACACCGGTGTTAACTTCATTACCGGCCTCTAG 1662 0.515 MANQQQQPLLSNNNKTPKFLSLLLTTVVGIGVLASSSLIANSYLSTKPSSDLCQHAVNRATCLAHVSEIAQGHILATTKDNYNLLQSFLVKSTSGIQEAMTTVNAVKIRLNATPRQEAALQVCADLMDLSISRVYDSVVALTKRTTLSLQDAHTWLSSVLTNHATCLDGLDGSARAIMEPQLSDLMSRARTSLAMFVAVLPTKAHQHQLLEEPLNREFPSWVTRTDRRLLESVAADIKANVVVAKDGSGKFKTVAEAVASAPDNGKTRYVIYVKKGTYKENVEISSKKKNVMLVGDGMDATIITGSLNFVDGTGTFQSATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADTSVINRCRIDAYQDTLYTHSNRQFYRDCVITGTIDFIFGNAAVVFQNCNLVARKPMSNQKNMVTAQGREDPNQNTGTSIQQCKITASSDLKPVVGSIKTYLGRPWKKYSRTVVMQSSIDGHIDPAGWSEWDDKTKDYLETLYYGEYMNSGAGAGTSKRVTWPGYHIITSAAEASKFTVAQLIQGDVWLQNTGVNFITGL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1345 553 PANTHER PECTINESTERASE 24 551 - -
Ahy5g1345 553 Gene3D - 233 553 IPR012334 -
Ahy5g1345 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 200 IPR035513 -
Ahy5g1345 553 Pfam Plant invertase/pectin methylesterase inhibitor 51 187 IPR006501 GO:0004857
Ahy5g1345 553 PANTHER PECTINESTERASE 24 551 - -
Ahy5g1345 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Ahy5g1345 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 194 IPR035513 -
Ahy5g1345 553 Pfam Pectinesterase 240 539 IPR000070 GO:0030599|GO:0042545
Ahy5g1345 553 SUPERFAMILY Pectin lyase-like 237 552 IPR011050 -
Ahy5g1345 553 SMART PMEI_2 44 195 IPR006501 GO:0004857
Ahy5g1345 553 CDD PMEI-like_4 53 199 - -
Ahy5g1345 553 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Ahy5g1345 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 32 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1345 Ahy-Chr5 36492004 36494565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1345 7 549 Carbohydrate Esterase AT1G11580 57.348 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1345 K01051 - gmx:100815836 801.971