Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1344 ATGGCTACACATCAACAACAAAAACCTCTTCTTCTACATAACCATCATCAAAATAAAAAATCACTGTTGTTGATCTTTGATGGTGTTGTCGCCTCAACAGTTTTCATTGCTTCATATCTCATCATCAGAACCACCTCCTTCTCCTCCTTCAGCCTCTCCTCCTCATCGTCATCACCTCATCACCATGATGATCTCTATCAACATGCCATTCACAGAGCAACCTGCTTGGCCCATGTCTCAGAAATAGCACAACAAGACCCCATTTTGGCCACCACAAAAGGCCACAACTTCAATCTTCTCCAATCCTTCCTTACGAAGTCCAACTCAGGCATCCAAGAAGCCATGGACATGGCATCCGCCATCAAGATCCGCTTCAACGGTAGTCCAAAGGAGGAAGCAGCTTTACAAGTCTGTGCAGACCTCATGGACTTGTCCATTGGTAGAGTTCTTCAATCAGTGGTGGCTCTCACTAAAAGGAACACTACTCATTCTCTGCAAGATGCACACACATGGCAGAGCAGTGTTCTCACCAACCATGCCACTTGCTTGGATGGCTTAGAAGGCTTCTCTGCTCGTGCCATTATGGAGCCTCAACTCCGGGACTTAATATTTAGGTCGAGGACCTCTCTGGCCGTGCTTGCTGCACTTCTGCCACCGTTAGACAGCGAAAATCAACAACTCCTTGAGGAGCCACAGAACGGAGATATTCCGACATGGGTGACACGCAACGATATGAGGCTTTTGGAGTCTGTGGCTGCTGATATAAAGGCTAATGTTGTGGTGGCCAAGGATGGAAGCGGCAATAAGTTCAAGACGATGGCAGAGGCTGTGGCTTCTGCACCTGACAACAGTAAAACAAGGTACGTAATCTATGTGAAGAAGCAGGGAACGTACAAAGAGAATGTTGAGATCGGTAAAAAAAAGAAGAACGTCATGCTTGTTGGTGACAGTATGGATAAAACAATAATCACAGGGAGCTTGAATTATGTGGATGGAACTCCCACCTTCCAAACTGCCACCATTGCGGCTGTTGGTGATGGATTTATAGGGCAGGACATTTGGTTCCAAAACACGGCAGGCCCAGAGAAGCACCAAGTCGTGGCACTCCGTGTGGGCGCTGACACCTCCGTGATTAACCGGTGCTGCATTGATGCGTACCAGGACACTCTCTACGTTCACAGCAACAGGTAG 1191 0.4761 MATHQQQKPLLLHNHHQNKKSLLLIFDGVVASTVFIASYLIIRTTSFSSFSLSSSSSSPHHHDDLYQHAIHRATCLAHVSEIAQQDPILATTKGHNFNLLQSFLTKSNSGIQEAMDMASAIKIRFNGSPKEEAALQVCADLMDLSIGRVLQSVVALTKRNTTHSLQDAHTWQSSVLTNHATCLDGLEGFSARAIMEPQLRDLIFRSRTSLAVLAALLPPLDSENQQLLEEPQNGDIPTWVTRNDMRLLESVAADIKANVVVAKDGSGNKFKTMAEAVASAPDNSKTRYVIYVKKQGTYKENVEIGKKKKNVMLVGDSMDKTIITGSLNYVDGTPTFQTATIAAVGDGFIGQDIWFQNTAGPEKHQVVALRVGADTSVINRCCIDAYQDTLYVHSNR* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1344 396 PANTHER PECTINESTERASE 40 396 - -
Ahy5g1344 396 SMART PMEI_2 46 212 IPR006501 GO:0004857
Ahy5g1344 396 PANTHER PECTINESTERASE 40 396 - -
Ahy5g1344 396 Gene3D - 251 396 IPR012334 -
Ahy5g1344 396 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 92 204 IPR035513 -
Ahy5g1344 396 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 216 IPR035513 -
Ahy5g1344 396 Pfam Pectinesterase 258 396 IPR000070 GO:0030599|GO:0042545
Ahy5g1344 396 SUPERFAMILY Pectin lyase-like 255 396 IPR011050 -
Ahy5g1344 396 CDD PMEI-like_4 75 216 - -
Ahy5g1344 396 TIGRFAM PME_inhib: pectinesterase inhibitor domain 108 191 IPR006501 GO:0004857
Ahy5g1344 396 Pfam Plant invertase/pectin methylesterase inhibitor 73 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1344 Ahy-Chr5 36428660 36431148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1344 8 396 Carbohydrate Esterase AT1G11580 46.970 7.41e-104 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1344 K01051 - gmx:100815836 450.669