Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1328 ATGCTAGGCTCTCTCATTGAAAAGTCTAGGGGACTAGCAGTTTTATTGAAATCTAGCCAGCAGTTAACCAGTAAAAGCAAACGGGATGAAGCAGTGTTCCATCATCCAGATTTTCCACGATTACATGGCGTAATATCCGAGGACTCCCCTTATATTGATTTTGGATCACTTTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAACTTGGACAAGGTGGCTTTGGTCCAGTTTACAAGGGGATTCTAAGCAATGAGCAGGAGGTAGCAATCAAGAGGCTCTCAACCTGTTCTGAACAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTCATAATGAAGCTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGGGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAACGGTAGCCTTGATGTACTCCTTTTCGATCCTAACGAACGTGCAAAGCTAGTTTGGACGAAATGCCTTGATATAATAGATGGATTAGCAAGGGGGATTCTTTATCTTCACGAAGACTCTCGACTTAAAATTATTCATAGAGACCTAAAAGCAAGCAATGTGTTGTTGGACTCAGATATGAATCCAAAGATCTCGGACTTTGGAATGGCAAAAATATTCGCAGGGAATGAAGGCGAAGCTAACACAGCTACAATAGTTGGCACATAG 690 0.4072 MLGSLIEKSRGLAVLLKSSQQLTSKSKRDEAVFHHPDFPRLHGVISEDSPYIDFGSLCVATKNFSDSNKLGQGGFGPVYKGILSNEQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVLLFDPNERAKLVWTKCLDIIDGLARGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMAKIFAGNEGEANTATIVGT* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1328 229 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 229 - -
Ahy5g1328 229 Pfam Protein tyrosine and serine/threonine kinase 67 214 IPR001245 GO:0004672|GO:0006468
Ahy5g1328 229 ProSiteProfiles Protein kinase domain profile. 64 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1328 229 SMART serkin_6 64 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1328 229 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 37 229 - -
Ahy5g1328 229 Gene3D Phosphorylase Kinase; domain 1 25 139 - -
Ahy5g1328 229 SUPERFAMILY Protein kinase-like (PK-like) 47 229 IPR011009 -
Ahy5g1328 229 Gene3D Transferase(Phosphotransferase) domain 1 140 229 - -
Ahy5g1328 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1328 Ahy-Chr5 36025530 36026588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1328 54 229 Receptor kinase-like Gene Family AT4G11530 64.773 4.33e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy5g1328 PK_Tyr_Ser-Thr 2.40E-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1328 - - ahf:112803446 452.21