Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1282 ATGGATGAACAGAATGAATTCGAACAAGATTTCGGAGATGAATTTATGGAGGGAGCGTATTTTTCTGAAGCTGATCAGTCAGAAGATATCCTTGAAGCTGCTTATGCAGTTGACTCCGTGCAAGACATTACAACTTTGAATTTTAGTGAAAATTTTGCGGAAAAAATTGGTAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTGTATGCCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGGTGTGAAGCTCGAATGGATGTTAAATTTGTACCAAAAACTGGAAGGTGGCATATCTTTTATTTCTCTGATGAACACAACCATGATCTATTAGATACACAATTCAGTGCTATGTTGCCTGCCTAA 510 0.3745 MDEQNEFEQDFGDEFMEGAYFSEADQSEDILEAAYAVDSVQDITTLNFSENFAEKIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCHRQGFREEKYYTMEKRKKEPRLETRTGCEARMDVKFVPKTGRWHIFYFSDEHNHDLLDTQFSAMLPA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1282 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 165 - -
Ahy5g1282 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 17 165 - -
Ahy5g1282 169 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1282 Ahy-Chr5 34998664 34999173 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1282 FAR1 2.80E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1282 - - ahf:114927759 350.132