Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1280 ATGCCTCTTCTACTCTCAGCTTCACAACCTCCCCTACTCCCTCTCATCCCACACAGTAATAAAACTCTCATCACACTTCCTAGAAAGCGCTTTGGTTTCGCTCCCAACACCTTAACAACCCCACCCTCTCTTCGTTCCAGGCGCATTCTCCCTAAATCTTCTGCTTCTTCCTCTTCTTCCATCAACGGTGTTTCCCTTGAGGACATTCCAGAACATTCCAGAAACGAAGAATCAACTTCTCCTACTCGGGATGAGTTCCTTCTCCTCCAAACGCTCCGAACCTGGCTCCGCTTCCTCCCTTCCATTCTCCCCGGTGGATCCTGGTGGAACTTCGACGACGACATCGAAATCGAGCTACTGGCTCAGCCGGTTTCTGTCTGGCGCGCACTCGGCAAGATGTGGCACCTCGTCGCGCGTGACCGCTGGATCATCTTCGCCGCCTTCACCGCTCTCATTTTCGCGGCGGTGTCTGAGATTTCGATACCGCATTTCTTGACGGCGTCGATTTTCACGGCGCAGAGCGCGGAGATTGCGGTTTTTCACCAGAATGTGCGGCTTTTGGTTCTGTTGTGTGTGATCTCGGGAATATGCAGTGGGATAAGAGGCTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTATTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGTAGACTCGGGGCAGATTGTCAACAAGTGTCTAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGGACAGGTTCATTAATCTACTTGGTGATTTTGTCTTGGCCACTTGGTTTATGTACGTTGATGATATGCATCCTGTTAGGAGCAGTTATGGTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACCTTATCTCTCATTCGAACTGTCCGTGTTTATGGAACAGAAGAAGTAGAACATGGAAGGTACAAATGGTGGCTGGAGAAATTAGCTGACATAAGCCTGCGACAAAGTGCTGCATATGGGTTTTGGAATTTAAGCTTCAATGCTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGGATGTCTATTCTTGCTGGACATATTACTGCTGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTTACCTAGCAGCCAATTCACAGAAAGAGGAGTAAAGTTGCAGGGGTTGATGGGGCAAATCGAGTTTCTAAATGTATCTTTTCGCTACCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTGGTCCATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACACTGGTGAACCTTTTGCTTCGTCTCTATGAGCCGACAAGTGGCCAGATTTTGGTAGATGGCATTCCTATTAAAGACTTCGACATCATGTGGTGGAGAGGGAGAATAGGATATGTTGGACAGGAACCCAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGTTGTACTCGCGATGTAACACAGGAAGATGTTGAATGGGCTGCAAAGGAGGCCTATGCTCATGATTTCATCACAGCACTTCCTAACGGTTATGAAACAGTTGTTGACGACGATCTATTAAGTGGGGGTCAAAAGCAGCGAATCGCTATTGCTAGAGCCATCCTTCGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAACGTTAAGGGTGTTCTTCGATCCGTCAGAAGTGACTCTACATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCCACCATACAAGCCGCTGACAGGATTGTGGTAATGGATGGTGGTCAAGTTGTTGAGATTGGAAGTCATAGAGAACTTCTCCTAAAAGATGGTTTATATGCTCGGTTGACTCGAAAACAGGCAGATGCCATGGCATGA 2118 0.4547 MPLLLSASQPPLLPLIPHSNKTLITLPRKRFGFAPNTLTTPPSLRSRRILPKSSASSSSSINGVSLEDIPEHSRNEESTSPTRDEFLLLQTLRTWLRFLPSILPGGSWWNFDDDIEIELLAQPVSVWRALGKMWHLVARDRWIIFAAFTALIFAAVSEISIPHFLTASIFTAQSAEIAVFHQNVRLLVLLCVISGICSGIRGCCFGIANMILVKRMRETLYSSLILQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLVILSWPLGLCTLMICILLGAVMVHYGRYQKKAARLIQEVTASANDVAQETLSLIRTVRVYGTEEVEHGRYKWWLEKLADISLRQSAAYGFWNLSFNALYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLLPSSQFTERGVKLQGLMGQIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGIPIKDFDIMWWRGRIGYVGQEPKLFRMDISSNIRYGCTRDVTQEDVEWAAKEAYAHDFITALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSTSRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1280 705 PANTHER ABC TRANSPORTER B FAMILY 84 704 - -
Ahy5g1280 705 Gene3D ABC transporter type 1, transmembrane domain 290 457 IPR036640 GO:0005524|GO:0016021
Ahy5g1280 705 MobiDBLite consensus disorder prediction 37 66 - -
Ahy5g1280 705 SMART AAA_5 487 676 IPR003593 -
Ahy5g1280 705 Pfam ABC transporter 479 626 IPR003439 GO:0005524
Ahy5g1280 705 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 460 699 IPR003439 GO:0005524
Ahy5g1280 705 CDD ABC_6TM_TAP 147 434 - -
Ahy5g1280 705 Pfam ABC transporter transmembrane region 144 411 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g1280 705 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 84 704 - -
Ahy5g1280 705 Gene3D ABC transporter type 1, transmembrane domain 116 289 IPR036640 GO:0005524|GO:0016021
Ahy5g1280 705 ProSitePatterns ABC transporters family signature. 598 612 IPR017871 GO:0005524
Ahy5g1280 705 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 145 426 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy5g1280 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 700 IPR027417 -
Ahy5g1280 705 Gene3D - 458 701 IPR027417 -
Ahy5g1280 705 MobiDBLite consensus disorder prediction 37 80 - -
Ahy5g1280 705 SUPERFAMILY ABC transporter transmembrane region 132 442 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1280 Ahy-Chr5 34881744 34888258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1280 215 703 Calmodulin-binding Proteins AT2G36910 34.531 1.14e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1280 - - gmx:100813359 1083.94