Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1250 ATGATCACAAAAATGATTAAAACAATCCTTCTCATCCCTTCTCAATTCATTATTTTCCTTCTCATCAACTCAGTAATGGCAGAACCAAGGGCAAGAACAATCCAAATAGCATGTGGTCATCAACTAGAGCACAACAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGAAGTACCGGATTTGGAACAACAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCCGAGGCAAGGACGGTTCTTCCTCAGTGCTTCCCTTTCAATGGTGGGCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATACAGGAGCAGGAGATAATGCAGTATGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGAAGCTGCAAAGCAAGCAACTCTAACAGCAGTTCAAGATGCACTTAGCAATAAAGGATATGCTAGAGGGAAGGTCGCCGTGGCCGGAACAGTTAATGAGTCTGCTTATGTGCTGGCTGATTGTTGGAGGACTTTGAACACAAGCTCTTGTAAAGCATGTCTTCAGAATGCATCAACTTCTCTATTGGGATGCTTGCCTTGGGAAGAAGGCCGTGCGCTTTACACCGGTTGCTTCATGAGGTTCTCAGACAAAGATTTCCTCAACAAGGAGCAGGAAAATGGAAGCTCAAAGGGTAATGTAATAGTGCTGGTGGTTGCAGTGGTTAGTTCATTGATTGTTTTTGTGGTTGGAATAGCTATTGGGATATATATCTTGAAACTTAGATACATTCAAAAGAAAAGAAGAGGTTCATATGATACAGAAAAGTTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAGGGCTACTGGATCCTTTGATGAGACTAACAAGTTAGGACAAGGAGGATTTGGAACAGTTTACAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAATAACAAACATAGAGCAGGAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCCGACTGTTAGGATGCAGTTGTTCAGGACCCGAAAGCCTGCTTGTGTATGAATATCTGCCCAACAGAAGTCTCGATCGCTTCATTTTTGACAAGAATAAGGGAAGAGAACTGAACTGGGAGAAGAGATACGAAATCATCGTTGGGACAGCTGAAGGATTAGCATACCTACATGAGAATTCTAAAACCAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTCTTGGATGCAAAGCTTCGTGCTAAAATCGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTTGGAGTGCTACTGCTAGAGATAGTTACCGGGAGACAGAACAACAGGAGCAAAGCAGCTGAATATTCAGACAGCCTAATTACAGTGGCATGGAAACACTTTCAGTCAGGGACAGCTGAACAATTATTTGATCCAAATCTTCAGTTGCATGAAGACTACAACAACAGCAGTGTTAAGAATGAGATCTTAAGAGTGGTTCAAATAGGACTTCTATGCACCCAAGAGAACCATTTGTTGCGGCCAACTATGTCAAAAGTGCTGCAGATGCTAACAAAGAAGGAGGAGCAACTTGTTGCTCCTTCTAATCCACCTTTCCTAGATGAGAATACCATGGAATTCTGTGACATAAGTGGTGACCCATTTTTCCCTCTCGTTGCAGATGACTCAGTCGCTACCATGTCCCATAGCTCTTTTCATCCCAGTTCATTTGTACAAAAATTCAATGGAAAATCAAAGTTACACTTGCCAATATACATTTTGAGTTCTTGGCAGACTTCGCCACCCTTTAAATCCTCTCGACACGAGGAACACAAAATTGGGAGTGCTAGCTGCAACCTTTATGAAAAAGGTAGTTGGAAGAGTGTGTATCTCTGA 2118 0.4188 MITKMIKTILLIPSQFIIFLLINSVMAEPRARTIQIACGHQLEHNSTIYVPNFVATMEKISEQMRSTGFGTTVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNGGRIYLDGCFMRAENYSFFDEYTGAGDNAVCGNRTRKNSSFQEAAKQATLTAVQDALSNKGYARGKVAVAGTVNESAYVLADCWRTLNTSSCKACLQNASTSLLGCLPWEEGRALYTGCFMRFSDKDFLNKEQENGSSKGNVIVLVVAVVSSLIVFVVGIAIGIYILKLRYIQKKRRGSYDTEKLAKSLRRSSLNFKYTSLERATGSFDETNKLGQGGFGTVYKGVLPDGREIAIKRLYFNNKHRAGDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGRELNWEKRYEIIVGTAEGLAYLHENSKTKIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKAAEYSDSLITVAWKHFQSGTAEQLFDPNLQLHEDYNNSSVKNEILRVVQIGLLCTQENHLLRPTMSKVLQMLTKKEEQLVAPSNPPFLDENTMEFCDISGDPFFPLVADDSVATMSHSSFHPSSFVQKFNGKSKLHLPIYILSSWQTSPPFKSSRHEEHKIGSASCNLYEKGSWKSVYL* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1250 705 Gene3D Phosphorylase Kinase; domain 1 284 397 - -
Ahy5g1250 705 SMART serkin_6 322 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1250 705 CDD STKc_IRAK 328 600 - -
Ahy5g1250 705 Gene3D Transferase(Phosphotransferase) domain 1 398 610 - -
Ahy5g1250 705 SUPERFAMILY Protein kinase-like (PK-like) 306 620 IPR011009 -
Ahy5g1250 705 ProSiteProfiles Gnk2-homologous domain profile. 31 132 IPR002902 -
Ahy5g1250 705 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 7 629 - -
Ahy5g1250 705 ProSiteProfiles Protein kinase domain profile. 322 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1250 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Ahy5g1250 705 Pfam Protein tyrosine and serine/threonine kinase 325 598 IPR001245 GO:0004672|GO:0006468
Ahy5g1250 705 Gene3D - 142 242 IPR038408 -
Ahy5g1250 705 Gene3D - 31 132 IPR038408 -
Ahy5g1250 705 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Ahy5g1250 705 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 7 629 - -
Ahy5g1250 705 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Ahy5g1250 705 Pfam Salt stress response/antifungal 47 130 IPR002902 -
Ahy5g1250 705 Pfam Salt stress response/antifungal 148 239 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1250 Ahy-Chr5 33919166 33922610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1250 10 647 Receptor kinase-like Gene Family AT1G70520 67.290 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy5g1250 PK_Tyr_Ser-Thr 4.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1250 - - gmx:100305420 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1250 5 33919166 33922610 Ahy15g1380 15 23599462 23602689 PCT
Ahy5g1250 5 33919166 33922610 Ahy3g3400 3 132736133 132740326 PCT