LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy5g1241	ATGGACACATTTGGATCGGAAGAAGAAAGCTTCTTTTCCCGCTCATTATTATCAGTAGCAGCAGCAGCAACAGCAGGGTTTCAATGGGGTTTCTTTGACTCTAGGGTTACAACAGCACGGTGGAAGCGGGTGAGCCTGGCATTCCCTCCTCCTTCGGTGAGCAGTCATCATAGCTCGCTCTTCTATGCAACAACCATTGATGCTGCTATGCCTACTATTGTTGGAATGGCACCGAAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCCAAAGAGGCAAGGGCTAGAATCAGATATGTTCACTTTTTACCTTTCAATCCTGTTGACAAGAGAACTTCTCTGACTTACATTGATGCTGATGGAAACTGGTACTGTGCCAGCAAAGGCGCTCCGGAGCAGATCATGAACTTGTGTAATCTAAGGGATGATGCTAAGAAGAAGGTTCATGCCATTATTGATAAGTTCGCCGAAAGAGGCCTTCGTTCCCTAGCCATTTCAAGACAGGAAGTTCCTTCTTGGCAAGACAAAGATGCAAGTATCGCCACACTTCCCGTCGAAGAGTTAATTGAGAAAGCCAATGGATTTGCCGGAATCTTTCCAGAGCCTCAAAAACTGTTACAACGGGAAGAATCTTTTAACAGTTGA	660	0.4545	MDTFGSEEESFFSRSLLSVAAAATAGFQWGFFDSRVTTARWKRVSLAFPPPSVSSHHSSLFYATTIDAAMPTIVGMAPKNQDAIDAAIVGMLADPKEARARIRYVHFLPFNPVDKRTSLTYIDADGNWYCASKGAPEQIMNLCNLRDDAKKKVHAIIDKFAERGLRSLAISRQEVPSWQDKDASIATLPVEELIEKANGFAGIFPEPQKLLQREESFNS*	220

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy5g1241	219	Pfam	Cation transport ATPase (P-type)	90	144	-	-
	Ahy5g1241	219	PANTHER	PLASMA MEMBRANE ATPASE	79	176	-	-
	Ahy5g1241	219	PANTHER	PLASMA MEMBRANE ATPASE	179	207	-	-
	Ahy5g1241	219	SUPERFAMILY	Metal cation-transporting ATPase, ATP-binding domain N	78	203	IPR023299	GO:0000166
	Ahy5g1241	219	PANTHER	CALCIUM-TRANSPORTING ATPASE	179	207	-	-
	Ahy5g1241	219	Gene3D	-	61	193	IPR023299	GO:0000166
	Ahy5g1241	219	PANTHER	CALCIUM-TRANSPORTING ATPASE	79	176	-	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy5g1241	Ahy-Chr5	33603144	33608648	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy5g1241	79	183	Primary Pumps ATPases	AT2G24520	75.238	6.47e-51	173

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy5g1241	K01535		-	ahf:112801147	425.246

Showing 1 to 1 of 1 entries