Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1224 ATGTCAACTTTGAATCAATTGTTTGATCTTTCAGAACAAATATGTTATGTCCAATGTGGATTCTGCACTACCATCTTGATGGTGAGTGTGCCATGCAGCAGCATGTCAATGGTGGTGACAGTGAGATGCGGACACTGCACAAGCCTTCTCTCTGTGAATATGATGAAAGCTTCTTTTGTCCCTTTACACCTCTTAGCTTCTCTTTCTACTCATCATCATCATCATTCAAAAGAAGAGGATGCAAACAACAACATCGCAATGAACAGTTCATCATCCATGATGATGATCAACTACTCCTCTGATGATTGTGCAGAAGAGGATGTAACCACAATCAACAATGTTGTCAACAAACCCCCGGAGAAAAGACAGCGAACTCCATCAGCTTATAACCGATTCATCAAAGAAGAAATTAAAAGGCTAAAGGCAGAAAACCCTGAAATGGCACACAAGGAGGCTTTCAGTACCGCTGCAAAAAATTGGGCCAATTTTCCACCAACTCAGTTCAATGGAGATGAAGAAATTTGCAATCAGAAAGAGCAGTTTGCGGATCTGGACTCCCAAGTGGACCGTCATTCTCATTCTCATGAGAGCATCAACGAAGAAGGTGAAAGTTTCCATGGAAGAAAGATGCAAAGAAATTCCATCATGGCAAGGACACAACTTGAATGA 669 0.4141 MSTLNQLFDLSEQICYVQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSTHHHHHSKEEDANNNIAMNSSSSMMMINYSSDDCAEEDVTTINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPEMAHKEAFSTAAKNWANFPPTQFNGDEEICNQKEQFADLDSQVDRHSHSHESINEEGESFHGRKMQRNSIMARTQLE* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1224 222 PANTHER AXIAL REGULATOR YABBY 4 1 187 - -
Ahy5g1224 222 MobiDBLite consensus disorder prediction 189 222 - -
Ahy5g1224 222 Pfam YABBY protein 10 169 IPR006780 GO:0007275
Ahy5g1224 222 SUPERFAMILY HMG-box 112 166 IPR036910 -
Ahy5g1224 222 MobiDBLite consensus disorder prediction 189 208 - -
Ahy5g1224 222 Gene3D High mobility group box domain 112 205 IPR036910 -
Ahy5g1224 222 PANTHER PROTEIN YABBY 6-RELATED 1 187 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1224 Ahy-Chr5 32961741 32964218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1224 2 222 C2C2-YABBY Transcription Factor Family AT1G23420 53.680 2.34e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy5g1224 YABBY 2.60E-65 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1224 K25796 - gmx:100806755 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1224 5 32961741 32964218 Ahy15g1406 15 24674623 24677919 PCT
Ahy5g1224 5 32961741 32964218 Ahy3g3415 3 132936993 132939133 PCT
Ahy15g1406 15 24674623 24677919 Ahy5g1224 5 32961741 32964218 PCT
Ahy3g3415 3 132936993 132939133 Ahy5g1224 5 32961741 32964218 PCT