Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1208 ATGAGTGGGGGTATAATGGCTTATAGCTACGAAGAAATCGTGGAAGTAACGAACGGGTTTTCGAGTGAGAACGTAATAGGAGAAGGTGGGTTCGGGAGTGTGTACAAGGCTTTAATGCCCGATGGTAGAGTAGGAGCAGTGAAGATGCTGAAACCTGGTAGTGGCCAAGGAGAAAGAGAGTTTAGGGCTGAGGTTGACATTATTAGTAGGATTCATCATCGTCATTTGGTTTCTTTGATTGGTTATTGCATAGCTGAGCAACATAGAGTTCTTGTCTATGAGTTTGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTACCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAGGGGCATAGCGTATCTGCATGAGGGCTGCAACCCAAGGATTATTCATAGGGATATTAAGTCCGCAAACATACTTTTGGATGGTGCTTATGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACTGATGACGCTAACACCCATGTATCAACCAGGGTGATGGGGACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACTGGAAGGAAGCCCGTTGATCCAAAGCGGCCCATCGGAGAAGAGAGTTTGGTTGAGTGGGTGGCAAGAGCCTTAGAGTGTGGAGAACAACTAGATCTATCAAATGGGGTGAAATATGGTCAAAGCAGAATATATGATTCAAGCCAGTACATTAATGATATTATGAGATTTAGAAGGATGATGGCTGATGGCAATTTTAGCGGTTACGACTATGATATGTATAGTACAGAACACAGTTCAAGAGAGTTGTCTCCTTCTTTAGGGATGCCAACTAGTTCAGGTGGTAATTCAGAACCTAGATCTTTCAACAACCATAGGAGCTTCTCTGACTCTGAGAAACCATAA 987 0.4336 MSGGIMAYSYEEIVEVTNGFSSENVIGEGGFGSVYKALMPDGRVGAVKMLKPGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQHRVLVYEFVPNGNLSQHLHGNNLPVLDWPNRMKIANGAARGIAYLHEGCNPRIIHRDIKSANILLDGAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKRPIGEESLVEWVARALECGEQLDLSNGVKYGQSRIYDSSQYINDIMRFRRMMADGNFSGYDYDMYSTEHSSRELSPSLGMPTSSGGNSEPRSFNNHRSFSDSEKP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1208 328 Gene3D Transferase(Phosphotransferase) domain 1 96 275 - -
Ahy5g1208 328 SUPERFAMILY Protein kinase-like (PK-like) 5 235 IPR011009 -
Ahy5g1208 328 ProSiteProfiles Protein kinase domain profile. 20 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1208 328 PANTHER RECEPTOR-LIKE KINASE 235 306 - -
Ahy5g1208 328 SMART serkin_6 20 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy5g1208 328 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Ahy5g1208 328 CDD STKc_IRAK 26 240 - -
Ahy5g1208 328 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 235 306 - -
Ahy5g1208 328 PANTHER RECEPTOR-LIKE KINASE 1 235 - -
Ahy5g1208 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Ahy5g1208 328 Pfam Protein tyrosine and serine/threonine kinase 23 221 IPR001245 GO:0004672|GO:0006468
Ahy5g1208 328 MobiDBLite consensus disorder prediction 294 328 - -
Ahy5g1208 328 MobiDBLite consensus disorder prediction 294 318 - -
Ahy5g1208 328 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1208 Ahy-Chr5 32539213 32542265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1208 1 296 Trihelix Transcription Factor Family AT1G70460 56.125 4.39e-128 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy5g1208 PK_Tyr_Ser-Thr 2.00E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1208 - - gsj:114401075 491.115