Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1202 ATGGATAGTGGCAGCAAAGGGAACTTGGATTTTTCGGGTCAATGGACCGATGGATGGAGTAGTGAGTCTGAAGAGGAAGAGGAAGAGGTCTTTAATGGGTTAGAGTCACCGTCACGAGTGGGCAAGGAGAGTGAGCCGGTAGAGAGAGTTGATGTATTTGGTGAAGGAGACAATGGTGGCAGAATGCGTTCATCGGAGTCACCAGGTGGTTCAGGCGATCAAATGAGTGATGATGTGCTTTCTTCGATGCTTTCAACTGCGGCTGCATTGGCCGATGTCGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGAAGTATGCAAAGGCGACTGGATTTGCTGATCGAAAAGGGGATTCCATTAAAGATGATGAAGACAATGTTATGAGGAAATTTTTCTATTGCAATCGACAGGGCTTGCGGGAGAAGAAGCATTATGAGAGGGCGGATAGGAAGAAGGCGCATAAGGTAGAGACTAGGACCAACTGTAGTGCGAAGTTCGTTGTATTTTTAGACAAACAGAGTGGCAAGTGGAGGACGAAGATATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCAGCCCACCGCAATATCAACAAAGGTGATAAAGTCCACATTCATAGTATGCACGAAGCAGGATTCCAAACCAGTCAGATCATGGGGTTCTTTGCATATTTGTCTGGGGGTTATCGAAACTTGCACTTCATAAAGAATGATGTTTACAACTATATCGACGATTTACGTCGCTCTCGGATTGTTCAGGGCGATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACCGAAATGGATCCATTAGCTGTTGTAATGTACACATATTGTCCCGAAAATCACCTTGGTCATCTGTTTTGGTCAGACGGAGCGATGCGGTATGACTATGAGTGCTTTGGTGACGTGTTGGCATTCGATTCGACATATAGGAAGAATCTATACAACCGGCCTTTAGTAATATTTTCTGGCACTAATCACCACCGACAGACAATAATTTTTGGTTTCGGGTTGCCGGAGGACGAGAAAATTCCATCTTATAAGTGGCTGCTAGGCACTTTCCTTGAGGTCATGCATCAAAAAGAGCCCAAAGTTGTGGTTACAGATAGAGACGAGTCAATGAAGGAGACTGCTGTGTATGGTCATTTTGAGATAGAGGAGTTTGATCAGTATTGGGCAAACATCGTTGCTGCATTCGGGTTAGAGGAGAACGAATGGATTTGGGCAACGTTTATCAAGCCCTCGAATTGCTTGTTGGAGTTGGTCGAGAATCTTGAACGTGTGGTTAAGGACTACAGGAACAATGAGTTTATCGCAGACTACAAATCTCTATATTCAGAACCGGTCATAACTACTGGACTAGAATCAATTGAGAGGGCCATCTCACAAATCTACACCAGAGAGATATTCTTCGAGGTCAAGAAACAGATCGAAGGGGTGGCTGCGTTGATAGTTCTTCATAGGGAGAGTTCTGGTAGTACGGAGAAGTTCATGTTTAGAAAGTTTCGTAAGCCTCGTCGGGTTTACTTTGTACTGTATGAAAGCAACTCTGAAAGGTATAAGTGTTCTTGCAAGCTTTGGAATAGCATAGGAATTCAATGCAGCCATATCATCTGTGTTTTGAAAGAGTTGGAGAAGGATGCCTTGCCGATGCGGTTGGTGCTGAAAAGATAG 1710 0.4398 MDSGSKGNLDFSGQWTDGWSSESEEEEEEVFNGLESPSRVGKESEPVERVDVFGEGDNGGRMRSSESPGGSGDQMSDDVLSSMLSTAAALADVEFHGVEEAYARYVKYAKATGFADRKGDSIKDDEDNVMRKFFYCNRQGLREKKHYERADRKKAHKVETRTNCSAKFVVFLDKQSGKWRTKIFVQDHNHDLTLPAFTNVMAAHRNINKGDKVHIHSMHEAGFQTSQIMGFFAYLSGGYRNLHFIKNDVYNYIDDLRRSRIVQGDAAAAISYLKGKTEMDPLAVVMYTYCPENHLGHLFWSDGAMRYDYECFGDVLAFDSTYRKNLYNRPLVIFSGTNHHRQTIIFGFGLPEDEKIPSYKWLLGTFLEVMHQKEPKVVVTDRDESMKETAVYGHFEIEEFDQYWANIVAAFGLEENEWIWATFIKPSNCLLELVENLERVVKDYRNNEFIADYKSLYSEPVITTGLESIERAISQIYTREIFFEVKKQIEGVAALIVLHRESSGSTEKFMFRKFRKPRRVYFVLYESNSERYKCSCKLWNSIGIQCSHIICVLKELEKDALPMRLVLKR* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1202 569 Coils Coil 427 447 - -
Ahy5g1202 569 ProSiteProfiles Zinc finger SWIM-type profile. 521 557 IPR007527 GO:0008270
Ahy5g1202 569 SMART 26again6 532 559 IPR006564 GO:0008270
Ahy5g1202 569 MobiDBLite consensus disorder prediction 1 19 - -
Ahy5g1202 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 388 IPR031052 GO:0006355
Ahy5g1202 569 MobiDBLite consensus disorder prediction 1 78 - -
Ahy5g1202 569 PANTHER OS02G0262500 PROTEIN 89 388 - -
Ahy5g1202 569 MobiDBLite consensus disorder prediction 41 56 - -
Ahy5g1202 569 Pfam MULE transposase domain 315 389 IPR018289 -
Ahy5g1202 569 Pfam FAR1 DNA-binding domain 105 193 IPR004330 -
Ahy5g1202 569 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1202 Ahy-Chr5 32403828 32405750 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy5g1202 FAR1 3.00E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1202 - - ahf:112803395 1138.25