Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1172 ATGAAGATTCCAGGAGTGACAACACTAATGGTAACAGTTCAGTGCTTGGAAGTGGGTTTGAACACATTAATCAAAGAAGCCACAGCCAAAGGAATGAGTGACTTTGTTTTCGTTGTGTATTCAAATGCCATGGCCCTCTGTTTCCTTCTACCTTCTGCCTTTATCTATTACAGCTGTTGTGAACAGACGTTGATGTATACTGGTATTGGATATAGCTCTCCTACATTGGCTTCAGCTATGGTGGATCTCACTCCAGCTTTTACCTATATTGTTGCTCTCATTTCCCGGTTGGAAAAGCTTAACATGAAACTACGGAGTGGCAAGGCAAAAAGCATAGGCACTGTGGTCTCAATTGTAGGGGCATTGGTGGTGACCCTACACGAAGGCTTCCCATTAACAAGTCACCGTGGTCCGCCGCATAACATCGTCGTCTCGGGTGAAAACTTAATTCCTGAACCATCGGATTGGGTGCTCGGAGGCTTCCTTCTTTCGGCCGGCAGCTTCTGTCTTTCGCTCGTCTTCATTGTCAAGACATGGATTATCAAGGATTACCCTGAAGAGTTAATGGTAGCAACAATTTCTTGTAGTTTTGTGATCATCCTTTCAAGTATAGTAGCTCTCATTGTTGACTCAAGTGCACAAGCATGGTTGCTCAAACCTGACACAGAGTTGATAGCTATAGTGTATTCAGGAATATTTGTTGTGTCATTGCGTAGCATTGTGCATATATGGGCATGTAGAAAAAGAGGACCTGTGTATGTTGCTATGTTCAATCCTTTGGGGATGGTAATTTCACTTGCCATGGGGGTCACATTTCTTAAGGACACGCTCTATCTAGGAAGCATAATTGGAGCTGGTGTTATAGCTCTTGGGTTTTATGGCGTGATATGGGGGCAGGATCAAGAAGAAAAGATGGTAGATGAGAAAAATAATGGAAGATGTGACTCTGTGTCATCATCTTCTTCTACGGCTCCTTTGTTGCAAAACAAGAGCATTCATGTATAG 1005 0.4318 MKIPGVTTLMVTVQCLEVGLNTLIKEATAKGMSDFVFVVYSNAMALCFLLPSAFIYYSCCEQTLMYTGIGYSSPTLASAMVDLTPAFTYIVALISRLEKLNMKLRSGKAKSIGTVVSIVGALVVTLHEGFPLTSHRGPPHNIVVSGENLIPEPSDWVLGGFLLSAGSFCLSLVFIVKTWIIKDYPEELMVATISCSFVIILSSIVALIVDSSAQAWLLKPDTELIAIVYSGIFVVSLRSIVHIWACRKRGPVYVAMFNPLGMVISLAMGVTFLKDTLYLGSIIGAGVIALGFYGVIWGQDQEEKMVDEKNNGRCDSVSSSSSTAPLLQNKSIHV* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1172 334 MobiDBLite consensus disorder prediction 312 334 - -
Ahy5g1172 334 PANTHER WAT1-RELATED PROTEIN 13 301 IPR030184 GO:0016021|GO:0022857
Ahy5g1172 334 Pfam EamA-like transporter family 159 296 IPR000620 GO:0016020|GO:0016021
Ahy5g1172 334 MobiDBLite consensus disorder prediction 310 334 - -
Ahy5g1172 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 213 300 - -
Ahy5g1172 334 PANTHER WAT1-RELATED PROTEIN 13 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1172 Ahy-Chr5 30683949 30688725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1172 8 329 Nodulin-like Gene Family AT3G28050 40.625 3.39e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1172 - - qlo:115978999 377.096